Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA13P31271 AC073614.1-201ENST00000438690 650 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA13P31271 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA13P31271 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA13P31271 RPL37P6-201ENST00000460682 294 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 LARP1BP2-201ENST00000486594 519 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 HIGD1AP13-201ENST00000509878 289 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AL117351.2-201ENST00000513571 157 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 SNORA18.6-201ENST00000516792 115 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNA5SP337-201ENST00000517007 109 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNU2-46P-201ENST00000517038 113 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 RNA5SP291-201ENST00000517222 105 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 NRON-201ENST00000517270 370 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA13P31271 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA13P31271 AC100870.1-201ENST00000522035 505 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 CASP1P1-201ENST00000526345 212 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.33□□□□□ -1.88
HOXA13P31271 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.33□□□□□ -1.88
HOXA13P31271 AC009063.1-201ENST00000563342 702 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 DUXAP4-201ENST00000603046 613 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC091805.2-201ENST00000603848 235 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AL589743.7-201ENST00000612637 233 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 AC015540.1-201ENST00000615828 501 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 FRG1KP-201ENST00000623592 341 ntBASIC3.33□□□□□ -1.88
HOXA13P31271 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA13P31271 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HOXA13P31271 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HOXA13P31271 RNU6-1284P-201ENST00000363701 100 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 RNU6-1215P-201ENST00000384441 102 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 AL359634.1-202ENST00000404721 284 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 AL513331.1-201ENST00000411908 397 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA13P31271 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA13P31271 AL451054.2-201ENST00000420896 202 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 TAAR7P-201ENST00000436141 242 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA13P31271 GAPDHP27-201ENST00000447427 1020 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 MTND1P12-201ENST00000455231 147 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 SNORA59A-201ENST00000459326 152 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 SNORD42A-201ENST00000459584 64 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 KLF3P2-201ENST00000465138 268 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA13P31271 RN7SL633P-201ENST00000488974 297 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 RPL37P25-201ENST00000507308 276 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 AC091826.1-201ENST00000514065 313 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 RNU2-10P-201ENST00000516375 211 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 MTCYBP20-201ENST00000524239 1129 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA13P31271 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA13P31271 AL589994.2-201ENST00000621124 579 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA13P31271 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 SCARNA15.3-201ENST00000626315 122 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 SCARNA4.1-201ENST00000628597 123 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.32□□□□□ -1.88
HOXA13P31271 TPTE2P4-201ENST00000258589 1605 ntBASIC3.32□□□□□ -1.88
HOXA13P31271 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA13P31271 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HOXA13P31271 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXA13P31271 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA13P31271 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA13P31271 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA13P31271 OR5J1P-201ENST00000313544 939 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 RNU6-701P-201ENST00000384059 107 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 RNU6-517P-201ENST00000384362 110 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 RPL23AP32-201ENST00000395315 459 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 NDUFS5P1-201ENST00000405668 289 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA13P31271 RNU2-36P-201ENST00000410361 191 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA13P31271 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 MTND1P4-201ENST00000435196 415 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 PGBD4P3-201ENST00000440731 581 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 PIGFP3-201ENST00000441918 722 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 MTATP6P30-201ENST00000443540 664 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA13P31271 RBM43P1-201ENST00000476891 1081 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXA13P31271 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AC006445.2-201ENST00000510061 472 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AF213884.2-201ENST00000510417 903 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA13P31271 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXA13P31271 AC016957.1-201ENST00000534895 309 ntBASIC3.31□□□□□ -1.88
HOXA13P31271 ARL2BPP2-201ENST00000550907 489 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms