Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMBP28068 AC007151.1-201ENST00000572774 483 ntBASIC1.5□□□□□ -2.17
HLA-DMBP28068 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.5□□□□□ -2.17
HLA-DMBP28068 AC120349.2-201ENST00000625002 298 ntBASIC1.5□□□□□ -2.17
HLA-DMBP28068 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DMBP28068 AC025048.6-202ENST00000627667 438 ntBASIC1.5□□□□□ -2.17
HLA-DMBP28068 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HLA-DMBP28068 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DMBP28068 AL354685.2-201ENST00000448218 1447 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 RNU6-28P-201ENST00000362378 107 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 RPL22P22-201ENST00000395439 379 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 CCNG1P1-201ENST00000406783 885 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 NDUFS5P4-201ENST00000412983 318 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 ZNF90P2-204ENST00000419323 1075 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL451054.2-201ENST00000420896 202 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL139421.1-201ENST00000423010 169 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 DPRXP1-201ENST00000426312 460 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC093106.2-201ENST00000428212 385 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC055731.1-201ENST00000474387 401 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 TRBV1-201ENST00000476502 284 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC068587.2-201ENST00000478386 781 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC114981.1-201ENST00000503897 678 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 HMGB3P17-201ENST00000504195 649 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 MIR892C-201ENST00000516410 77 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL133241.1-201ENST00000556832 487 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC122134.1-202ENST00000569111 1201 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 NRBF2P1-201ENST00000587407 859 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC025165.5-201ENST00000602802 578 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AC239868.4-201ENST00000608318 671 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.49□□□□□ -2.17
HLA-DMBP28068 AL138478.1-201ENST00000612252 832 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 U2.21-201ENST00000637295 81 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 MTND5P29-201ENST00000458676 1807 ntBASIC1.49□□□□□ -2.17
HLA-DMBP28068 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AL138713.1-201ENST00000624026 2130 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 Y_RNA.234-201ENST00000364409 97 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RNU6-707P-201ENST00000364647 95 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RNU6-359P-201ENST00000365466 108 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RNA5SP88-201ENST00000365560 109 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DMBP28068 RNU6-207P-201ENST00000384137 107 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 SNORD65.1-201ENST00000390889 71 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AL079342.1-201ENST00000401460 267 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 MIR1289-2-201ENST00000408360 111 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 U6atac.2-201ENST00000408644 118 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 EIF1AXP1-201ENST00000419267 435 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 EIF4EP4-201ENST00000424916 578 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RPS3AP44-201ENST00000425466 790 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 RPL30P4-201ENST00000429309 333 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 HMGN2P3-201ENST00000433603 273 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 HMGN2P5-201ENST00000436882 273 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC093155.1-201ENST00000440164 826 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AL500527.1-201ENST00000448532 255 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DMBP28068 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC069294.1-201ENST00000608397 350 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC103710.1-201ENST00000610003 901 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC024257.5-201ENST00000612739 531 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC005332.6-201ENST00000613178 446 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 AC093875.1-201ENST00000623688 504 ntBASIC1.48□□□□□ -2.17
HLA-DMBP28068 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DMBP28068 AP006437.1-201ENST00000641440 3685 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HLA-DMBP28068 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DMBP28068 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DMBP28068 RNU5B-1-201ENST00000363286 116 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 SNORA23-201ENST00000365128 182 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 RNU6-637P-201ENST00000384050 107 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 MIR218-1-201ENST00000384999 110 ntBASIC1.47□□□□□ -2.17
HLA-DMBP28068 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms