Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFX1P22670 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RFX1P22670 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.3□□□□□ -1.56
RFX1P22670 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
RFX1P22670 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 SNORA31-201ENST00000362607 130 ntBASIC5.3□□□□□ -1.56
RFX1P22670 Y_RNA.106-201ENST00000363189 100 ntBASIC5.3□□□□□ -1.56
RFX1P22670 RNA5SP189-201ENST00000364920 115 ntBASIC5.3□□□□□ -1.56
RFX1P22670 MIR1252-201ENST00000408861 65 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AC098614.2-201ENST00000426040 255 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AL732292.1-201ENST00000426692 226 ntBASIC5.3□□□□□ -1.56
RFX1P22670 RPL21P91-201ENST00000429231 479 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AL159987.2-201ENST00000432754 307 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AC004938.1-201ENST00000438468 308 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AL078601.1-201ENST00000444542 271 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX1P22670 OR1H1P-201ENST00000448731 937 ntBASIC5.3□□□□□ -1.56
RFX1P22670 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.3□□□□□ -1.56
RFX1P22670 AL591473.1-201ENST00000464297 313 ntBASIC5.3□□□□□ -1.56
RFX1P22670 HMGN2P13-201ENST00000476476 274 ntBASIC5.3□□□□□ -1.56
RFX1P22670 RN7SL283P-201ENST00000489055 303 ntBASIC5.3□□□□□ -1.56
RFX1P22670 SLC25A15P5-201ENST00000508033 253 ntBASIC5.3□□□□□ -1.56
RFX1P22670 RNU6-1282P-201ENST00000516735 96 ntBASIC5.3□□□□□ -1.56
RFX1P22670 MIR5188-201ENST00000583467 113 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AC005255.1-201ENST00000593748 216 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AC004805.2-201ENST00000605382 482 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AC100812.1-201ENST00000607622 580 ntBASIC5.3□□□□□ -1.56
RFX1P22670 AL161629.2-201ENST00000615347 275 ntBASIC5.3□□□□□ -1.56
RFX1P22670 MIR8069-1-201ENST00000616627 86 ntBASIC5.3□□□□□ -1.56
RFX1P22670 MIR8069-2-201ENST00000621412 86 ntBASIC5.3□□□□□ -1.56
RFX1P22670 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.3□□□□□ -1.56
RFX1P22670 AC027309.3-201ENST00000623419 351 ntBASIC5.3□□□□□ -1.56
RFX1P22670 MTND5P27-201ENST00000428871 1720 ntBASIC5.3□□□□□ -1.56
RFX1P22670 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RFX1P22670 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFX1P22670 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX1P22670 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX1P22670 RNU4-42P-201ENST00000364738 142 ntBASIC5.29□□□□□ -1.56
RFX1P22670 RNA5SP428-201ENST00000365129 132 ntBASIC5.29□□□□□ -1.56
RFX1P22670 RNU6-827P-201ENST00000365553 106 ntBASIC5.29□□□□□ -1.56
RFX1P22670 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX1P22670 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX1P22670 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX1P22670 RPL36AP10-201ENST00000421785 322 ntBASIC5.29□□□□□ -1.56
RFX1P22670 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFX1P22670 AC092573.2-201ENST00000434546 243 ntBASIC5.29□□□□□ -1.56
RFX1P22670 SNRPEP9-201ENST00000436794 238 ntBASIC5.29□□□□□ -1.56
RFX1P22670 IGLV2-34-201ENST00000490007 283 ntBASIC5.29□□□□□ -1.56
RFX1P22670 AC139453.3-201ENST00000493276 369 ntBASIC5.29□□□□□ -1.56
RFX1P22670 Y_RNA.687-201ENST00000516558 91 ntBASIC5.29□□□□□ -1.56
RFX1P22670 RNU6-572P-201ENST00000516724 80 ntBASIC5.29□□□□□ -1.56
RFX1P22670 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.29□□□□□ -1.56
RFX1P22670 AL110118.1-201ENST00000553543 400 ntBASIC5.29□□□□□ -1.56
RFX1P22670 MIR1254-2-201ENST00000579553 63 ntBASIC5.29□□□□□ -1.56
RFX1P22670 AC053481.4-201ENST00000583164 216 ntBASIC5.29□□□□□ -1.56
RFX1P22670 AC006363.1-201ENST00000603806 463 ntBASIC5.29□□□□□ -1.56
RFX1P22670 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX1P22670 CR381572.2-201ENST00000624852 397 ntBASIC5.29□□□□□ -1.56
RFX1P22670 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.29□□□□□ -1.56
RFX1P22670 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX1P22670 ZNF299P-201ENST00000406845 1804 ntBASIC5.29□□□□□ -1.56
RFX1P22670 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RFX1P22670 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX1P22670 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
RFX1P22670 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RFX1P22670 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.29□□□□□ -1.56
RFX1P22670 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFX1P22670 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 AC079741.1-201ENST00000321498 212 ntBASIC5.28□□□□□ -1.56
RFX1P22670 Y_RNA.476-201ENST00000384347 108 ntBASIC5.28□□□□□ -1.56
RFX1P22670 RN7SKP27-201ENST00000410684 333 ntBASIC5.28□□□□□ -1.56
RFX1P22670 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX1P22670 EIF4HP2-201ENST00000424380 563 ntBASIC5.28□□□□□ -1.56
RFX1P22670 RPL18P10-201ENST00000425606 538 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX1P22670 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 AC000111.2-201ENST00000448200 210 ntBASIC5.28□□□□□ -1.56
RFX1P22670 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFX1P22670 RPL23AP24-201ENST00000458203 385 ntBASIC5.28□□□□□ -1.56
RFX1P22670 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX1P22670 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.28□□□□□ -1.56
RFX1P22670 RN7SL817P-201ENST00000480777 288 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AP005902.1-201ENST00000521358 186 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AC131281.1-201ENST00000522984 164 ntBASIC5.28□□□□□ -1.56
RFX1P22670 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.28□□□□□ -1.56
RFX1P22670 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.28□□□□□ -1.56
RFX1P22670 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.28□□□□□ -1.56
RFX1P22670 MIR5701-3-201ENST00000578890 82 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms