Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AP001486.2-201ENST00000561652 5113 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AL158163.1-201ENST00000603915 1649 ntBASIC4.22□□□□□ -1.73
ATF4P18848 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.22□□□□□ -1.73
ATF4P18848 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 RNU6-336P-201ENST00000364891 107 ntBASIC4.22□□□□□ -1.73
ATF4P18848 RNU6-1160P-201ENST00000384546 104 ntBASIC4.22□□□□□ -1.73
ATF4P18848 MIR3074-201ENST00000384885 81 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AP000580.1-201ENST00000404439 358 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 AC016769.2-201ENST00000414815 475 ntBASIC4.22□□□□□ -1.73
ATF4P18848 MTND2P23-201ENST00000422990 651 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AC018865.2-201ENST00000423631 129 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 AC099799.1-201ENST00000439809 192 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AL354714.3-201ENST00000447284 493 ntBASIC4.22□□□□□ -1.73
ATF4P18848 HMGN2P10-201ENST00000448085 265 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 AZGP1P2-201ENST00000454506 345 ntBASIC4.22□□□□□ -1.73
ATF4P18848 HMGN2P13-201ENST00000476476 274 ntBASIC4.22□□□□□ -1.73
ATF4P18848 RN7SL177P-201ENST00000476596 299 ntBASIC4.22□□□□□ -1.73
ATF4P18848 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 RNU6-699P-201ENST00000517081 110 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.22□□□□□ -1.73
ATF4P18848 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.22□□□□□ -1.73
ATF4P18848 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 AC020895.1-201ENST00000595362 272 ntBASIC4.22□□□□□ -1.73
ATF4P18848 AL021997.2-201ENST00000615674 271 ntBASIC4.22□□□□□ -1.73
ATF4P18848 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 AL732372.2-225ENST00000642124 456 ntBASIC4.22□□□□□ -1.73
ATF4P18848 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 CDC27P3-201ENST00000635418 1910 ntBASIC4.22□□□□□ -1.73
ATF4P18848 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
ATF4P18848 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATF4P18848 AC008725.1-201ENST00000605123 2263 ntBASIC4.21□□□□□ -1.73
ATF4P18848 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
ATF4P18848 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ATF4P18848 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.21□□□□□ -1.73
ATF4P18848 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
ATF4P18848 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RNU6-858P-201ENST00000362436 107 ntBASIC4.21□□□□□ -1.74
ATF4P18848 SNORA64.1-201ENST00000362600 132 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RNU6-227P-201ENST00000362865 103 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RNU6-105P-201ENST00000363909 104 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RN7SKP153-201ENST00000365026 316 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RNU1-100P-201ENST00000365255 165 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.21□□□□□ -1.74
ATF4P18848 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.21□□□□□ -1.74
ATF4P18848 EIF4EP2-201ENST00000422816 654 ntBASIC4.21□□□□□ -1.74
ATF4P18848 MTND3P9-201ENST00000429526 346 ntBASIC4.21□□□□□ -1.74
ATF4P18848 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.21□□□□□ -1.74
ATF4P18848 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.21□□□□□ -1.74
ATF4P18848 YWHAEP1-201ENST00000453697 763 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC091685.2-201ENST00000454924 864 ntBASIC4.21□□□□□ -1.74
ATF4P18848 CEACAMP4-201ENST00000457676 421 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RN7SL583P-201ENST00000475692 287 ntBASIC4.21□□□□□ -1.74
ATF4P18848 RPL17P19-201ENST00000489069 552 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.21□□□□□ -1.74
ATF4P18848 NDUFB4P9-201ENST00000511646 388 ntBASIC4.21□□□□□ -1.74
ATF4P18848 SNORA25.10-201ENST00000515926 124 ntBASIC4.21□□□□□ -1.74
ATF4P18848 SNORA31.18-201ENST00000517043 134 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.21□□□□□ -1.74
ATF4P18848 AP000867.2-201ENST00000532468 320 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.21□□□□□ -1.74
ATF4P18848 AC021739.1-201ENST00000559631 174 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC025946.2-201ENST00000603398 234 ntBASIC4.21□□□□□ -1.74
ATF4P18848 FO393422.1-201ENST00000603908 708 ntBASIC4.21□□□□□ -1.74
ATF4P18848 SUMO2P15-201ENST00000604285 278 ntBASIC4.21□□□□□ -1.74
ATF4P18848 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.21□□□□□ -1.74
ATF4P18848 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.21□□□□□ -1.74
ATF4P18848 MIR6839-201ENST00000620425 113 ntBASIC4.21□□□□□ -1.74
ATF4P18848 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.21□□□□□ -1.74
ATF4P18848 AC005086.4-201ENST00000623065 213 ntBASIC4.21□□□□□ -1.74
ATF4P18848 CU639417.4-201ENST00000623928 207 ntBASIC4.21□□□□□ -1.74
ATF4P18848 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.21□□□□□ -1.74
ATF4P18848 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ATF4P18848 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ATF4P18848 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.21□□□□□ -1.74
ATF4P18848 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ATF4P18848 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.2□□□□□ -1.74
ATF4P18848 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.2□□□□□ -1.74
ATF4P18848 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ATF4P18848 RNU1-20P-201ENST00000363314 162 ntBASIC4.2□□□□□ -1.74
ATF4P18848 RN7SKP160-201ENST00000363804 340 ntBASIC4.2□□□□□ -1.74
ATF4P18848 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms