Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.23□□□□□ -1.73
SNRPA1P09661 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SNRPA1P09661 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNRPA1P09661 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.22□□□□□ -1.73
SNRPA1P09661 RNU1-70P-201ENST00000362618 164 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 RNA5SP167-201ENST00000365461 116 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNRPA1P09661 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNRPA1P09661 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 RNU2-39P-201ENST00000410604 198 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 RNU6-1148P-201ENST00000410992 104 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 EEF1A1P40-201ENST00000412883 573 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC126124.2-201ENST00000413542 321 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.22□□□□□ -1.73
SNRPA1P09661 RPL7P12-201ENST00000446719 750 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.22□□□□□ -1.73
SNRPA1P09661 RPS4XP2-201ENST00000458402 793 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 MRPS17P3-201ENST00000465453 385 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC116562.3-201ENST00000506136 177 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 RNU4-60P-201ENST00000517239 135 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 BTF3P12-201ENST00000519620 469 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC107953.1-201ENST00000522216 297 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AC068587.5-201ENST00000528506 175 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AC125611.2-201ENST00000551907 647 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 ANP32BP3-201ENST00000559213 706 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AC016727.1-205ENST00000605437 569 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 HMGB1P50-201ENST00000605814 607 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AC009248.2-201ENST00000619826 254 ntBASIC4.22□□□□□ -1.73
SNRPA1P09661 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNRPA1P09661 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.22□□□□□ -1.73
SNRPA1P09661 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.22□□□□□ -1.73
SNRPA1P09661 AL157700.1-201ENST00000561973 1432 ntBASIC4.21□□□□□ -1.73
SNRPA1P09661 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SNRPA1P09661 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNRPA1P09661 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC017071.1-201ENST00000564407 2204 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNRPA1P09661 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNRPA1P09661 MIR634-201ENST00000385208 97 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AL136372.1-201ENST00000403060 228 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.21□□□□□ -1.74
SNRPA1P09661 RPL35AP12-201ENST00000425362 338 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 DUTP6-201ENST00000425573 462 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 SRIP2-201ENST00000428470 166 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AL353705.1-201ENST00000433468 480 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC005094.1-201ENST00000440420 368 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC016696.1-201ENST00000446949 318 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 RPL27AP5-201ENST00000469428 449 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC126389.1-201ENST00000477436 290 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC006445.1-201ENST00000491925 405 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC105417.1-201ENST00000514691 285 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 RNU6-1153P-201ENST00000516760 105 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.21□□□□□ -1.74
SNRPA1P09661 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC022690.1-201ENST00000526681 550 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 DEFB108D-201ENST00000527787 222 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 OR5AL2P-201ENST00000532185 920 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC093027.1-201ENST00000546698 429 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.21□□□□□ -1.74
SNRPA1P09661 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.21□□□□□ -1.74
SNRPA1P09661 MIR4293-201ENST00000584305 78 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC044792.1-201ENST00000593294 196 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 AC135507.2-201ENST00000612443 309 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.21□□□□□ -1.74
SNRPA1P09661 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.21□□□□□ -1.74
SNRPA1P09661 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNRPA1P09661 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.21□□□□□ -1.74
SNRPA1P09661 MTND5P17-201ENST00000418405 1603 ntBASIC4.21□□□□□ -1.74
SNRPA1P09661 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNRPA1P09661 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNRPA1P09661 AC008725.1-201ENST00000605123 2263 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNRPA1P09661 RNU6-188P-201ENST00000364207 107 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 RNU4-20P-201ENST00000365601 151 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 RNU6-637P-201ENST00000384050 107 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.2□□□□□ -1.74
SNRPA1P09661 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNRPA1P09661 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.2□□□□□ -1.74
SNRPA1P09661 MRPL50P4-201ENST00000446432 475 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 MTND3P16-201ENST00000452205 344 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.2□□□□□ -1.74
SNRPA1P09661 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNRPA1P09661 RPS15AP36-201ENST00000492022 382 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 AC092436.1-201ENST00000506450 503 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 AC112206.3-201ENST00000514578 389 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 RNU4-29P-201ENST00000515943 174 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 RN7SKP219-201ENST00000516825 296 ntBASIC4.2□□□□□ -1.74
SNRPA1P09661 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms