Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ARPC3P1-201ENST00000437218 533 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 USP9YP15-201ENST00000442391 422 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 RPL37P4-201ENST00000448908 268 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.35□□□□□ -1.87
ATP2A1O14983 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP2A1O14983 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATP2A1O14983 AC011979.2-201ENST00000527568 352 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AP005205.1-201ENST00000563503 508 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 CYCSP39-201ENST00000565821 309 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 MIR3913-1-201ENST00000577744 102 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC138761.3-201ENST00000579993 334 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 MIR4298-201ENST00000584380 73 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.35□□□□□ -1.87
ATP2A1O14983 AC106900.2-201ENST00000604994 317 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AP000860.1-201ENST00000605250 559 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 NDUFA8P1-201ENST00000605525 367 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC103710.2-201ENST00000609912 942 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 SDR42E1P2-201ENST00000614861 481 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC010133.1-201ENST00000615809 842 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC068831.7-201ENST00000616954 363 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC072046.2-201ENST00000618366 268 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 AC007998.5-201ENST00000622938 237 ntBASIC3.35□□□□□ -1.87
ATP2A1O14983 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
ATP2A1O14983 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.35□□□□□ -1.87
ATP2A1O14983 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
ATP2A1O14983 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 RNU6-511P-201ENST00000363496 107 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.34□□□□□ -1.87
ATP2A1O14983 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 RNU6-1042P-201ENST00000384204 107 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AL354719.1-201ENST00000406535 843 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 MTCO3P41-201ENST00000414801 328 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 RPL7L1P10-201ENST00000427790 463 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 OR2AS1P-201ENST00000427827 319 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AC104850.1-201ENST00000435940 476 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AL136380.1-201ENST00000447970 162 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AC010631.1-201ENST00000474150 156 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC114797.1-201ENST00000514003 728 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 Vault.3-201ENST00000516676 95 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 RNU6-430P-201ENST00000517078 107 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.34□□□□□ -1.87
ATP2A1O14983 FAM60DP-201ENST00000524174 632 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ATP2A1O14983 AC093012.1-202ENST00000549403 582 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AL355836.1-201ENST00000555951 870 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.34□□□□□ -1.87
ATP2A1O14983 RPL23AP84-201ENST00000571193 464 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.34□□□□□ -1.87
ATP2A1O14983 AC245014.2-201ENST00000603689 287 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC246785.4-201ENST00000605374 287 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC098614.4-201ENST00000607601 462 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC005332.10-201ENST00000612725 619 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AC008498.1-201ENST00000613012 531 ntBASIC3.34□□□□□ -1.87
ATP2A1O14983 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.34□□□□□ -1.87
ATP2A1O14983 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.34□□□□□ -1.87
ATP2A1O14983 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.34□□□□□ -1.87
ATP2A1O14983 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.34□□□□□ -1.87
ATP2A1O14983 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATP2A1O14983 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
ATP2A1O14983 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATP2A1O14983 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
ATP2A1O14983 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 RNU4-75P-201ENST00000364621 146 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 MIR514A1-201ENST00000385133 98 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 RPS3AP36-201ENST00000398190 775 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 RNA5SP184-201ENST00000411071 108 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 RNU6-195P-201ENST00000411352 109 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AC127391.1-201ENST00000411737 98 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 MRPL50P2-201ENST00000416821 482 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 MTND3P17-201ENST00000416968 344 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 ELOCP4-201ENST00000420090 333 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 NUP35P1-201ENST00000422734 947 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AL589823.1-201ENST00000429577 183 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 GAPDHP27-201ENST00000447427 1020 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AL359385.1-201ENST00000456509 365 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.33□□□□□ -1.88
ATP2A1O14983 MTCO2P4-201ENST00000517968 247 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AP001804.3-201ENST00000525146 880 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.33□□□□□ -1.88
ATP2A1O14983 AC005951.2-201ENST00000576282 495 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AC005951.1-201ENST00000576706 485 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 MTND1P15-201ENST00000579262 949 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AL133393.1-201ENST00000603277 287 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AC091805.2-201ENST00000603848 235 ntBASIC3.33□□□□□ -1.88
ATP2A1O14983 AL133173.2-201ENST00000614270 90 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms