Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC006566.1-201ENST00000608943 513 ntBASIC3.06□□□□□ -1.92
O00370 AC245517.5-201ENST00000611529 162 ntBASIC3.06□□□□□ -1.92
O00370 AC131902.3-201ENST00000611767 581 ntBASIC3.06□□□□□ -1.92
O00370 AC009090.3-201ENST00000616553 565 ntBASIC3.06□□□□□ -1.92
O00370 AC091953.2-201ENST00000623979 160 ntBASIC3.06□□□□□ -1.92
O00370 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
O00370 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
O00370 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.05□□□□□ -1.92
O00370 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.05□□□□□ -1.92
O00370 AL390237.1-201ENST00000404226 1415 ntBASIC3.05□□□□□ -1.92
O00370 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
O00370 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
O00370 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
O00370 RNU6-198P-201ENST00000384258 104 ntBASIC3.05□□□□□ -1.92
O00370 MIR634-201ENST00000385208 97 ntBASIC3.05□□□□□ -1.92
O00370 RNU6-754P-201ENST00000391166 107 ntBASIC3.05□□□□□ -1.92
O00370 SNORA26.7-201ENST00000391288 122 ntBASIC3.05□□□□□ -1.92
O00370 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
O00370 EEF1A1P41-201ENST00000414667 207 ntBASIC3.05□□□□□ -1.92
O00370 AL645937.1-202ENST00000421799 937 ntBASIC3.05□□□□□ -1.92
O00370 ISCA1P6-201ENST00000427740 390 ntBASIC3.05□□□□□ -1.92
O00370 AL590383.1-201ENST00000428602 75 ntBASIC3.05□□□□□ -1.92
O00370 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.05□□□□□ -1.92
O00370 MTCO3P45-201ENST00000443036 613 ntBASIC3.05□□□□□ -1.92
O00370 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.05□□□□□ -1.92
O00370 AL033528.1-201ENST00000453780 140 ntBASIC3.05□□□□□ -1.92
O00370 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.05□□□□□ -1.92
O00370 snoU109.1-201ENST00000459339 135 ntBASIC3.05□□□□□ -1.92
O00370 MTND4LP3-201ENST00000468320 276 ntBASIC3.05□□□□□ -1.92
O00370 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.05□□□□□ -1.92
O00370 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
O00370 AC022447.1-201ENST00000515358 464 ntBASIC3.05□□□□□ -1.92
O00370 RNU6-1256P-201ENST00000516539 103 ntBASIC3.05□□□□□ -1.92
O00370 AP003122.4-201ENST00000530980 758 ntBASIC3.05□□□□□ -1.92
O00370 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.05□□□□□ -1.92
O00370 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.05□□□□□ -1.92
O00370 KC877982.1-201ENST00000602313 470 ntBASIC3.05□□□□□ -1.92
O00370 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.05□□□□□ -1.92
O00370 AC008277.2-201ENST00000605196 797 ntBASIC3.05□□□□□ -1.92
O00370 RNU6-87P-201ENST00000607561 108 ntBASIC3.05□□□□□ -1.92
O00370 AC098614.4-201ENST00000607601 462 ntBASIC3.05□□□□□ -1.92
O00370 AC138749.5-201ENST00000611461 208 ntBASIC3.05□□□□□ -1.92
O00370 AL020991.1-201ENST00000612314 373 ntBASIC3.05□□□□□ -1.92
O00370 AC008498.1-201ENST00000613012 531 ntBASIC3.05□□□□□ -1.92
O00370 AC093838.1-201ENST00000613014 469 ntBASIC3.05□□□□□ -1.92
O00370 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
O00370 AC116165.2-201ENST00000616705 206 ntBASIC3.05□□□□□ -1.92
O00370 AC099654.13-201ENST00000639774 207 ntBASIC3.05□□□□□ -1.92
O00370 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
O00370 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
O00370 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
O00370 TEX21P-201ENST00000447107 1476 ntBASIC3.04□□□□□ -1.92
O00370 AC092104.1-201ENST00000497346 1441 ntBASIC3.04□□□□□ -1.92
O00370 ASNSP3-201ENST00000451989 1306 ntBASIC3.04□□□□□ -1.92
O00370 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.04□□□□□ -1.92
O00370 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
O00370 RPL5P18-201ENST00000406671 891 ntBASIC3.04□□□□□ -1.92
O00370 RPS3AP3-201ENST00000411933 242 ntBASIC3.04□□□□□ -1.92
O00370 AC018630.2-202ENST00000422992 927 ntBASIC3.04□□□□□ -1.92
O00370 AL589872.1-201ENST00000426602 288 ntBASIC3.04□□□□□ -1.92
O00370 ARPC3P1-201ENST00000437218 533 ntBASIC3.04□□□□□ -1.92
O00370 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.04□□□□□ -1.92
O00370 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.04□□□□□ -1.92
O00370 NIPA2P5-201ENST00000452282 464 ntBASIC3.04□□□□□ -1.92
O00370 SNORA59A-201ENST00000459326 152 ntBASIC3.04□□□□□ -1.92
O00370 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.04□□□□□ -1.92
O00370 AC010587.1-201ENST00000505809 469 ntBASIC3.04□□□□□ -1.92
O00370 AC009901.1-201ENST00000506703 541 ntBASIC3.04□□□□□ -1.92
O00370 Y_RNA.672-201ENST00000516289 104 ntBASIC3.04□□□□□ -1.92
O00370 RNU1-103P-201ENST00000516502 125 ntBASIC3.04□□□□□ -1.92
O00370 SNORA18.6-201ENST00000516792 115 ntBASIC3.04□□□□□ -1.92
O00370 RNU6-928P-201ENST00000516876 104 ntBASIC3.04□□□□□ -1.92
O00370 AP003467.2-201ENST00000520175 319 ntBASIC3.04□□□□□ -1.92
O00370 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
O00370 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.04□□□□□ -1.92
O00370 AL355836.1-201ENST00000555951 870 ntBASIC3.04□□□□□ -1.92
O00370 AC010653.1-201ENST00000571108 881 ntBASIC3.04□□□□□ -1.92
O00370 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.04□□□□□ -1.92
O00370 AL139286.2-201ENST00000606838 396 ntBASIC3.04□□□□□ -1.92
O00370 AL627309.6-201ENST00000606857 840 ntBASIC3.04□□□□□ -1.92
O00370 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.04□□□□□ -1.92
O00370 AC010133.1-201ENST00000615809 842 ntBASIC3.04□□□□□ -1.92
O00370 AC108479.2-201ENST00000617314 601 ntBASIC3.04□□□□□ -1.92
O00370 AC092140.2-201ENST00000618027 521 ntBASIC3.04□□□□□ -1.92
O00370 AL603839.4-201ENST00000624658 1005 ntBASIC3.04□□□□□ -1.92
O00370 AC110079.1-202ENST00000635213 138 ntBASIC3.04□□□□□ -1.92
O00370 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.04□□□□□ -1.92
O00370 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
O00370 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
O00370 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
O00370 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
O00370 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
O00370 RNU6-223P-201ENST00000362830 107 ntBASIC3.03□□□□□ -1.92
O00370 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
O00370 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
O00370 RNU6-297P-201ENST00000384636 107 ntBASIC3.03□□□□□ -1.92
O00370 MIR514A1-201ENST00000385133 98 ntBASIC3.03□□□□□ -1.92
O00370 AL122016.1-201ENST00000403365 367 ntBASIC3.03□□□□□ -1.92
O00370 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.03□□□□□ -1.92
O00370 ELOCP4-201ENST00000420090 333 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms