Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC092376.2-201ENST00000622621 4116 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.813-201ENST00000364639 102 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AL139039.1-201ENST00000401900 692 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 HMGB1P18-201ENST00000438801 619 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 RPL7P5-201ENST00000471472 736 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 RPL31P60-201ENST00000478450 367 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 MTCO1P29-201ENST00000496868 288 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC009901.1-201ENST00000506703 541 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 SNORA14.1-201ENST00000516113 141 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 RNU6-277P-201ENST00000516272 106 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AP003122.3-201ENST00000526316 255 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC084851.1-201ENST00000529105 249 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AP000889.2-201ENST00000532684 490 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 TRAV28-201ENST00000557548 323 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC026464.5-201ENST00000562497 722 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC005668.1-201ENST00000571142 476 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC106900.2-201ENST00000604994 317 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 SNORD91B-202ENST00000608459 222 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 LINC00901.1-201ENST00000617252 152 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 AC118273.1-201ENST00000525324 3006 ntBASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC85CA6NKD9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC005183.1-201ENST00000603687 1979 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 Y_RNA.184-201ENST00000363884 108 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 RNU6-1013P-201ENST00000384180 107 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 RNU6-45P-201ENST00000384471 107 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 MIR301A-201ENST00000385261 86 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 RNA5SP219-201ENST00000390940 113 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 MIR1261-201ENST00000408659 82 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AL592045.1-201ENST00000429867 352 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 FTH1P6-201ENST00000430768 320 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 CYCSP24-201ENST00000445119 316 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC009237.8-201ENST00000445492 379 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 RPS15AP34-201ENST00000487776 387 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC079140.5-201ENST00000507882 310 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC007991.1-201ENST00000522680 631 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC135001.1-201ENST00000544546 283 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 GLYCAM1-201ENST00000546596 285 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AL352979.3-201ENST00000553515 247 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 Z99571.1-201ENST00000636677 394 ntBASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCDC85CA6NKD9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC007785.2-201ENST00000598627 1916 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 MIR449A-201ENST00000362113 91 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 RNU6-512P-201ENST00000364438 103 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 SNORA4.3-201ENST00000365564 137 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 Y_RNA.474-201ENST00000384341 102 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC087650.1-201ENST00000431445 468 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC006011.1-201ENST00000442758 349 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AL360271.2-201ENST00000447710 161 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AL133162.1-201ENST00000463228 453 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 CYCSP27-201ENST00000527643 293 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 MIR1273C-201ENST00000578669 77 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 MIR5692A1-201ENST00000580523 69 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 MIR548AC-201ENST00000585049 88 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AC243960.4-201ENST00000600532 288 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 AL133383.2-201ENST00000622958 2336 ntBASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CCDC85CA6NKD9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC85CA6NKD9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms