Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC005858.4-201ENST00000623191 700 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC006927.2-201ENST00000639256 389 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 AC005539.1-201ENST00000443768 1479 ntBASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAV41A0A0B4J266 RNA5SP138-201ENST00000365098 114 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 RPL23AP29-201ENST00000397284 453 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 RNU2-2P-201ENST00000410396 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC004383.1-201ENST00000438135 289 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 USP9YP22-201ENST00000438971 294 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 MTND2P20-201ENST00000440805 661 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 ATG12P2-201ENST00000456830 416 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 RPL26P9-201ENST00000457466 433 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 SNORD121B-201ENST00000458838 81 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC068781.1-201ENST00000488231 618 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC026801.1-201ENST00000497178 464 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 MTCO1P9-201ENST00000505577 1534 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 HMGB1P28-201ENST00000507778 552 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 MTCYBP16-201ENST00000509187 1129 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC008837.1-201ENST00000511513 412 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC006499.2-201ENST00000513470 337 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 MIR892C-201ENST00000516410 77 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 RNU2-19P-201ENST00000517288 84 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC104417.1-201ENST00000523974 751 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 SLC2A13P1-201ENST00000531560 322 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC104072.1-201ENST00000568817 668 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC008121.1-201ENST00000603244 268 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC011451.2-201ENST00000604303 598 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC136601.2-201ENST00000604356 474 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 FTX_3.1-201ENST00000610451 147 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.15-201ENST00000611544 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.16-201ENST00000613119 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.12-201ENST00000613778 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.20-201ENST00000613956 192 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC010678.1-201ENST00000614118 713 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.9-201ENST00000615427 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.11-201ENST00000616345 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.2-201ENST00000616535 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.3-201ENST00000617785 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.19-201ENST00000618602 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 RNU2-1-201ENST00000618664 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.6-201ENST00000619225 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.5-201ENST00000619465 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 U2.10-201ENST00000620268 191 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 uc_338.20-201ENST00000621563 178 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC091932.3-201ENST00000624223 323 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 AC025048.6-202ENST00000627667 438 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 MTND1P37-201ENST00000636562 264 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.53□□□□□ -2.16
TRAV41A0A0B4J266 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-884P-201ENST00000363889 107 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNA5SP125-201ENST00000364843 120 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU1-148P-201ENST00000384472 162 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-140P-201ENST00000384566 108 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-952P-201ENST00000391164 108 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AL079342.1-201ENST00000401460 267 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RPL7P27-201ENST00000403775 720 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU2-33P-201ENST00000410344 192 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 MTCO2P5-201ENST00000422621 426 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC093106.2-201ENST00000428212 385 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 PTGES3P1-201ENST00000439531 483 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 MTCYBP42-201ENST00000444653 1130 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 BX322784.1-201ENST00000455793 1077 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU7-136P-201ENST00000458819 69 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC068587.2-201ENST00000478386 781 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC114981.1-201ENST00000503897 678 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-714P-201ENST00000516963 103 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AP003497.1-201ENST00000528472 562 ntBASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.52□□□□□ -2.17
TRAV41A0A0B4J266 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms