Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC009237.8-201ENST00000445492 379 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 CBWD4P-201ENST00000445695 655 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RBMY2UP-201ENST00000453474 324 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-261P-201ENST00000459506 102 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC084357.1-201ENST00000473404 255 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC233702.1-201ENST00000482905 502 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 HMGN1P11-201ENST00000508668 303 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC105417.1-201ENST00000514691 285 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-123P-201ENST00000516163 102 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 RN7SKP83-201ENST00000516512 178 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC004024.1-201ENST00000549244 247 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AL133241.1-201ENST00000556832 487 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC068135.2-201ENST00000569293 1028 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 SNORA59B-202ENST00000578183 701 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 MIR4429-201ENST00000580105 73 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 MIR4801-201ENST00000582704 82 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC174048.1-201ENST00000603389 144 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AP000907.4-201ENST00000604143 237 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC013553.2-201ENST00000604244 589 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC009570.1-201ENST00000609599 745 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC130324.3-201ENST00000614165 542 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AC090132.2-201ENST00000615881 347 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 AL732372.2-225ENST00000642124 456 ntBASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN16Q9Y5I7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 UBE2L2-201ENST00000254302 429 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.295-201ENST00000364918 102 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SNORD115-7-201ENST00000365306 82 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-877P-201ENST00000383868 107 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-817P-201ENST00000391083 104 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SAR1AP2-201ENST00000392696 594 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 USP9YP6-201ENST00000413550 854 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 MTCYBP8-201ENST00000422855 651 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 ATP5JP1-201ENST00000431631 322 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL591212.2-201ENST00000433923 257 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SEPT14P3-201ENST00000439401 183 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC016691.1-201ENST00000441321 413 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL732372.2-207ENST00000445840 183 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SEPT14P2-201ENST00000453405 183 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL162395.1-201ENST00000457882 422 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SNORD105B-201ENST00000458770 79 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 MTCO3P38-201ENST00000468910 766 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL163973.1-201ENST00000484753 577 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 MTAPP1-201ENST00000489154 819 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RPL21P129-201ENST00000491732 478 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RBBP4P6-201ENST00000508098 202 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 TTC39CP1-201ENST00000512513 755 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SEPT14P4-201ENST00000513445 186 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 RNA5SP401-201ENST00000515920 127 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 SNORA40.12-201ENST00000516329 111 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 FO082796.1-201ENST00000523795 183 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 OR5BN1P-201ENST00000532955 829 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC006504.3-201ENST00000586818 523 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC006077.1-201ENST00000604746 343 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 YWHAEP7-203ENST00000622054 312 ntBASIC3.35□□□□□ -1.87
CLDN16Q9Y5I7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms