Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 PPBPP1-201ENST00000510807 373 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC008958.1-201ENST00000511047 682 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 RNU6-1016P-201ENST00000516689 94 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC025423.5-201ENST00000550230 219 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 MIR5692A1-201ENST00000580523 69 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC073539.2-201ENST00000597113 165 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AL355802.3-201ENST00000607571 545 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC019193.3-201ENST00000609144 554 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 FAM27D1-201ENST00000612308 341 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC034102.8-201ENST00000615146 484 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 AC133104.2-201ENST00000615272 193 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 MTND5P19-201ENST00000424872 1794 ntBASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KCMF1Q9P0J7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC138393.1-203ENST00000327086 343 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RNU6-266P-201ENST00000364225 107 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RNU6-512P-201ENST00000364438 103 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SNORA22B-201ENST00000383876 138 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.534-201ENST00000384599 112 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 MIR578-201ENST00000384828 96 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 MIR514A1-201ENST00000385133 98 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.646-201ENST00000410980 101 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RPL23AP26-201ENST00000412728 464 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 MIR2053-201ENST00000459295 91 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC105137.1-201ENST00000484355 562 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC091167.1-201ENST00000492017 396 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SNORA31.9-201ENST00000516429 84 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 RNA5SP471-201ENST00000516971 106 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC087854.1-201ENST00000519706 414 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SNRPGP18-201ENST00000553000 214 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 uc_338.22-201ENST00000622722 187 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 AL512643.1-201ENST00000635735 524 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 Z99571.1-201ENST00000636677 394 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 KPNA2P1-201ENST00000458289 1591 ntBASIC4.02□□□□□ -1.77
KCMF1Q9P0J7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 RNU6-593P-201ENST00000364716 112 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 Y_RNA.473-201ENST00000384333 102 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC063979.1-201ENST00000415539 377 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC092017.2-201ENST00000427600 362 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC073063.1-201ENST00000434352 607 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 HSPD1P21-201ENST00000436541 245 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AL359672.1-201ENST00000442302 409 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 RPS15AP34-201ENST00000487776 387 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 HMGB1P22-201ENST00000505315 124 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC116337.1-201ENST00000509680 687 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 APOOP4-201ENST00000513530 597 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 RNU1-54P-201ENST00000517181 120 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC026371.1-201ENST00000551867 419 ntBASIC4.01□□□□□ -1.77
KCMF1Q9P0J7 AC136624.4-201ENST00000573044 370 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms