Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AP004247.1-201ENST00000531556 1289 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AMZ2P1-203ENST00000565833 850 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 RPL23AP84-201ENST00000571193 464 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 MIR4760-201ENST00000585040 80 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AF038458.1-201ENST00000588406 262 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 VN1R92P-201ENST00000598511 928 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AC105148.1-201ENST00000604961 409 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AC018714.1-201ENST00000605028 208 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AC005000.2-201ENST00000605468 310 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AP000240.1-201ENST00000609910 452 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AC092608.2-201ENST00000624427 218 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 DDX10P1-201ENST00000448545 1933 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 AC007785.2-201ENST00000598627 1916 ntBASIC2.12□□□□□ -2.07
HMG20AQ9NP66 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMG20AQ9NP66 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 TPTE2P4-201ENST00000258589 1605 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 HSPE1P11-201ENST00000339579 310 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 RNU6-1072P-201ENST00000384703 107 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 RNU6-443P-201ENST00000384780 107 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 MIR19A-201ENST00000384878 82 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 MIR27B-201ENST00000385129 97 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 RNU2-52P-201ENST00000410680 190 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC096664.2-201ENST00000411843 406 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 HMGB1P11-201ENST00000413899 637 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC019097.1-201ENST00000424783 735 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC063976.3-201ENST00000426849 329 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL035407.1-201ENST00000429211 571 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL356867.1-201ENST00000429623 299 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 ARL5AP4-201ENST00000430731 512 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 PGBD4P3-201ENST00000440731 581 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 CBWD4P-201ENST00000445695 655 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL606662.1-201ENST00000445763 553 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 RPS15AP34-201ENST00000487776 387 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 MTND1P24-201ENST00000552175 861 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL133153.1-201ENST00000557756 303 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 MIR4658-201ENST00000584344 65 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC234772.3-201ENST00000602277 528 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC107214.2-201ENST00000608204 634 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL391813.2-201ENST00000609113 322 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AL136313.1-201ENST00000624804 202 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC092192.1-201ENST00000633154 1018 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 AC110079.1-202ENST00000635213 138 ntBASIC2.11□□□□□ -2.07
HMG20AQ9NP66 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.11□□□□□ -2.07
HMG20AQ9NP66 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RNU1-52P-201ENST00000384190 164 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RNU6-1035P-201ENST00000384477 107 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 MIR34A-201ENST00000385130 110 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 TXNP7-201ENST00000406296 293 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC078974.1-201ENST00000411597 223 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 MTND1P21-201ENST00000412991 285 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AL451054.2-201ENST00000420896 202 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC011233.1-201ENST00000422812 283 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC010153.1-201ENST00000432862 727 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 LARP1BP3-201ENST00000437229 869 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AL354941.1-201ENST00000438600 464 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RPL7P36-201ENST00000444633 681 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 IFNA11P-201ENST00000446352 526 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 MTND1P9-201ENST00000453775 944 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RNU6-420P-201ENST00000458780 107 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC090515.1-201ENST00000465295 476 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC010631.1-201ENST00000474150 156 ntBASIC2.1□□□□□ -2.07
HMG20AQ9NP66 AC004263.1-201ENST00000479327 332 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms