Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC020550.1-201ENST00000447385 163 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC073901.1-201ENST00000462471 408 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC010631.1-201ENST00000474150 156 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC093809.1-201ENST00000509155 340 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 NDUFB4P2-201ENST00000509515 391 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 HSPE1P23-201ENST00000509838 286 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 RN7SKP24-201ENST00000515888 284 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 RNU6-415P-201ENST00000516252 97 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 RNU1-103P-201ENST00000516502 125 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 NACAP3-201ENST00000552100 481 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AL133153.1-201ENST00000557756 303 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 MIR4446-201ENST00000578505 67 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 VN1R82P-201ENST00000601481 356 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC007998.5-201ENST00000622938 237 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 MIR3199-2-201ENST00000636243 86 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC006927.4-201ENST00000639187 543 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 AC004520.1-201ENST00000608362 1413 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
POLR1EQ9GZS1 MTND5P29-201ENST00000458676 1807 ntBASIC2.56□□□□□ -2
POLR1EQ9GZS1 RNU6-433P-201ENST00000363216 104 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 SNORA38-201ENST00000363946 132 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.55□□□□□ -2
POLR1EQ9GZS1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 SEPT2P1-201ENST00000419651 180 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 MTCO2P21-201ENST00000419780 677 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 BPY2DP-201ENST00000422208 265 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC010153.1-201ENST00000432862 727 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 MTND1P32-201ENST00000433043 938 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 RPS27AP10-201ENST00000496103 208 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC020699.1-201ENST00000505161 445 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC098591.2-201ENST00000510152 315 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 RNU6-311P-201ENST00000516224 102 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 UBTFL10-201ENST00000528532 562 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC007115.1-201ENST00000546853 234 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC110491.1-201ENST00000562191 2010 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 AP000403.1-201ENST00000603349 851 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC107952.2-201ENST00000606048 486 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 RNU6-88P-201ENST00000606801 100 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC103710.1-201ENST00000610003 901 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AL050303.3-201ENST00000613704 284 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 MIR6817-201ENST00000615588 66 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.55□□□□□ -2
POLR1EQ9GZS1 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AP002791.1-201ENST00000623291 381 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AL356596.1-201ENST00000624230 379 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 AC097655.1-201ENST00000635075 318 ntBASIC2.55□□□□□ -2
POLR1EQ9GZS1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
POLR1EQ9GZS1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
POLR1EQ9GZS1 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 ELF2P3-201ENST00000445099 1506 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC010889.1-201ENST00000566193 2666 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNA5SP68-201ENST00000363885 119 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RPS4XP8-201ENST00000402039 771 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 RPS4XP7-201ENST00000406274 780 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AL008987.1-201ENST00000415528 237 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 USP9YP26-201ENST00000421008 661 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 ELOCP14-201ENST00000428070 331 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC244035.1-201ENST00000430042 390 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 MTND1P28-201ENST00000435623 950 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 ELOCP7-201ENST00000439968 331 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AL606517.1-201ENST00000446914 387 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 CECR9-201ENST00000453421 199 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNU7-59P-201ENST00000459101 61 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC105185.1-201ENST00000518705 535 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms