Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RPL31P53-201ENST00000457065 348 ntBASIC1.65□□□□□ -2.15
IFT140Q96RY7 SETP11-201ENST00000473027 690 ntBASIC1.65□□□□□ -2.15
IFT140Q96RY7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.65□□□□□ -2.15
IFT140Q96RY7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.65□□□□□ -2.15
IFT140Q96RY7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.65□□□□□ -2.15
IFT140Q96RY7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.65□□□□□ -2.15
IFT140Q96RY7 U8.3-201ENST00000363321 132 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 RNU6-167P-201ENST00000384292 106 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 SNORA1.3-201ENST00000384676 136 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 RNU4-78P-201ENST00000410940 126 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
IFT140Q96RY7 RPS29P23-201ENST00000458635 123 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.64□□□□□ -2.15
IFT140Q96RY7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.64□□□□□ -2.15
IFT140Q96RY7 AC087272.1-201ENST00000523624 533 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.64□□□□□ -2.15
IFT140Q96RY7 U6.48-201ENST00000618523 106 ntBASIC1.64□□□□□ -2.15
IFT140Q96RY7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
IFT140Q96RY7 RNU6-263P-201ENST00000363811 107 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 RNU4-42P-201ENST00000364738 142 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 RNU11-5P-201ENST00000391216 129 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 MTCO3P12-201ENST00000416718 547 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.63□□□□□ -2.15
IFT140Q96RY7 AC108120.2-201ENST00000512973 294 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
IFT140Q96RY7 AGGF1P5-201ENST00000567900 919 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.63□□□□□ -2.15
IFT140Q96RY7 AC096772.1-201ENST00000609146 564 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 AP001486.3-201ENST00000615334 372 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
IFT140Q96RY7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 CIR1P3-201ENST00000405137 479 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 PTGES3P2-201ENST00000407942 482 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 AL360221.1-201ENST00000445989 335 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 AC096745.1-201ENST00000509945 370 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 AC109809.1-201ENST00000619665 545 ntBASIC1.63□□□□□ -2.15
IFT140Q96RY7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
IFT140Q96RY7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC009296.1-201ENST00000443146 155 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 SNRPGP6-201ENST00000451124 220 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 PMCHL2-203ENST00000457791 237 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 SNORA31.8-201ENST00000516327 108 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 RNA5SP330-201ENST00000517096 96 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC022880.1-201ENST00000534017 973 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC087481.2-201ENST00000565492 330 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 AL355297.2-201ENST00000604792 129 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 AC005021.1-201ENST00000608730 355 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 AL355810.1-201ENST00000614629 552 ntBASIC1.62□□□□□ -2.15
IFT140Q96RY7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.61□□□□□ -2.15
IFT140Q96RY7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
IFT140Q96RY7 OR51A5P-201ENST00000415429 942 ntBASIC1.61□□□□□ -2.15
IFT140Q96RY7 RPL7P30-201ENST00000420888 709 ntBASIC1.61□□□□□ -2.15
IFT140Q96RY7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 AC015922.2-201ENST00000435593 184 ntBASIC1.61□□□□□ -2.15
IFT140Q96RY7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.61□□□□□ -2.15
IFT140Q96RY7 XIAPP1-201ENST00000603162 600 ntBASIC1.61□□□□□ -2.15
IFT140Q96RY7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC009812.4-201ENST00000569134 1805 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 UBE2V1P9-201ENST00000414760 368 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 AL356867.1-201ENST00000429623 299 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC093155.1-201ENST00000440164 826 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AL691517.1-201ENST00000440833 1235 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 RNU7-26P-201ENST00000458980 63 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC104629.2-201ENST00000468627 598 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 MIR6513-201ENST00000621188 64 ntBASIC1.6□□□□□ -2.15
IFT140Q96RY7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.6□□□□□ -2.15
IFT140Q96RY7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
IFT140Q96RY7 MT-TC-201ENST00000387405 66 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 SFR1P1-201ENST00000403720 688 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AL356320.2-201ENST00000417263 507 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC004941.2-201ENST00000427009 228 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AL645638.1-201ENST00000440519 361 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC022447.3-201ENST00000506865 495 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 RNU4-18P-201ENST00000516751 149 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms