Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 CR848007.1-201ENST00000442354 1699 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 MTCO1P9-201ENST00000505577 1534 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 Y_RNA.22-201ENST00000362492 102 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU6-511P-201ENST00000363496 107 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU5E-8P-201ENST00000363502 116 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU6-637P-201ENST00000384050 107 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU6-456P-201ENST00000384493 107 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TM9SF4Q92544 RPS3AP24-201ENST00000407896 734 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU6-516P-201ENST00000411381 104 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AL137014.1-201ENST00000420490 1226 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 MTND4LP11-201ENST00000422184 280 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 RPL23AP82-202ENST00000427528 469 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC005094.1-201ENST00000440420 368 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 MTND4P18-201ENST00000447010 465 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC027673.1-201ENST00000456245 405 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 RNU7-59P-201ENST00000459101 61 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC012181.1-201ENST00000479895 423 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC069439.1-201ENST00000494739 167 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 ARL2BPP2-201ENST00000550907 489 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC125611.2-201ENST00000551907 647 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.11□□□□□ -1.91
TM9SF4Q92544 SNORA59B-202ENST00000578183 701 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 MIR4293-201ENST00000584305 78 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC025449.1-201ENST00000603896 529 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 AC017083.3-201ENST00000609955 700 ntBASIC3.11□□□□□ -1.91
TM9SF4Q92544 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AL672296.1-201ENST00000427780 2158 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 Y_RNA.9-201ENST00000362354 101 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 RNA5SP383-201ENST00000362934 120 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 RNU1-39P-201ENST00000383897 165 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 RNU6-432P-201ENST00000384196 109 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 MIR1-2-201ENST00000384961 85 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 BEND7P1-201ENST00000422058 457 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC000111.3-201ENST00000433478 193 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 MTATP6P23-201ENST00000440153 476 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 MTATP6P30-201ENST00000443540 664 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 RPS24P6-201ENST00000452670 400 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC108059.3-201ENST00000456388 214 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 RNU6-420P-201ENST00000458780 107 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC109925.1-201ENST00000478069 331 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC023194.1-201ENST00000493084 308 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC116353.2-201ENST00000505332 712 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF4Q92544 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 Y_RNA.693-201ENST00000516641 110 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AP004371.1-201ENST00000525240 214 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AP003072.2-201ENST00000527756 676 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 RPS3AP4-201ENST00000555161 764 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC106782.4-201ENST00000568264 210 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC012182.1-201ENST00000570133 895 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC067852.3-201ENST00000589177 561 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 Z84480.1-201ENST00000605131 311 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AC004696.1-201ENST00000614345 607 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 AL450472.3-201ENST00000615578 367 ntBASIC3.1□□□□□ -1.91
TM9SF4Q92544 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
TM9SF4Q92544 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TM9SF4Q92544 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TM9SF4Q92544 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.09□□□□□ -1.91
TM9SF4Q92544 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms