Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 MIR513B-201ENST00000385136 84 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AL139039.1-201ENST00000401900 692 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 CCNG1P1-201ENST00000406783 885 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 MIR1305-201ENST00000408300 86 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 USP9YP26-201ENST00000421008 661 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC098614.2-201ENST00000426040 255 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 MTCO3P30-201ENST00000426425 670 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 USP12PX-201ENST00000432383 1057 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 ELOCP30-201ENST00000447108 299 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 RPL26P9-201ENST00000457466 433 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC107222.1-201ENST00000510899 637 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 MTND5P13-201ENST00000513046 1079 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 RNA5SP82-201ENST00000516707 92 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 RNA5SP290-201ENST00000517133 127 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 MTCO2P15-201ENST00000532655 656 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC007115.1-201ENST00000546853 234 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC025281.1-201ENST00000567026 265 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 BNIP3P23-201ENST00000599655 511 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 DPPA3P3-201ENST00000603842 430 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 BCRP9-201ENST00000605312 388 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC016597.2-201ENST00000613256 341 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC092608.2-201ENST00000624427 218 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AC006927.4-201ENST00000639187 543 ntBASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
NUDCD3Q8IVD9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 FAM133CP-201ENST00000332869 704 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-931P-201ENST00000363850 107 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-769P-201ENST00000384407 104 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MIR888-201ENST00000401186 77 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU2-49P-201ENST00000410666 184 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC023141.4-201ENST00000412031 328 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MTCO2P21-201ENST00000419780 677 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MTND1P32-201ENST00000433043 938 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC107083.1-201ENST00000439643 279 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 CR769776.1-201ENST00000441254 787 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC025750.2-201ENST00000442609 450 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 COX6CP12-201ENST00000446748 202 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC104685.1-201ENST00000502445 371 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 HSPE1P23-201ENST00000509838 286 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 LTV1P1-201ENST00000510683 1237 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RN7SKP132-201ENST00000516001 208 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-927P-201ENST00000516199 100 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 RNA5SP320-201ENST00000516263 124 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC013828.2-201ENST00000532487 235 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 LARP7P3-201ENST00000579888 337 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 ELOCP29-201ENST00000588193 334 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AL450336.1-201ENST00000605180 586 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC239868.4-201ENST00000608318 671 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MIR7106-201ENST00000612419 65 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 MIR7515-201ENST00000637837 67 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 AC103706.2-201ENST00000638080 240 ntBASIC2.34□□□□□ -2.03
NUDCD3Q8IVD9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.34□□□□□ -2.04
NUDCD3Q8IVD9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
NUDCD3Q8IVD9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NUDCD3Q8IVD9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
NUDCD3Q8IVD9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.04
NUDCD3Q8IVD9 ZNF876P-202ENST00000398732 1485 ntBASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.33□□□□□ -2.04
NUDCD3Q8IVD9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms