Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC007179.3-201ENST00000604976 235 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 MIR98-201ENST00000606724 119 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC098614.4-201ENST00000607601 462 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
LDB1Q86U70 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LDB1Q86U70 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.1□□□□□ -1.91
LDB1Q86U70 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LDB1Q86U70 UBE2L2-201ENST00000254302 429 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 OR5J1P-201ENST00000313544 939 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 RNU6-188P-201ENST00000364207 107 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 Y_RNA.245-201ENST00000364493 95 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 SNORA70.4-201ENST00000365509 134 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
LDB1Q86U70 RNU6-217P-201ENST00000384164 104 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 MIR558-201ENST00000384920 94 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LDB1Q86U70 RNU6-817P-201ENST00000391083 104 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AL663109.1-201ENST00000411498 844 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 ZNF863P-201ENST00000426746 417 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC093106.2-201ENST00000428212 385 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 MED13P1-201ENST00000428342 171 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 MTCO3P5-201ENST00000433620 714 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 ELOCP23-201ENST00000452014 332 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 snoU13.22-201ENST00000459428 104 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB1Q86U70 RPL7P5-201ENST00000471472 736 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC004924.1-201ENST00000480160 781 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 RN7SL504P-201ENST00000494496 287 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 SNORD59.2-201ENST00000516873 68 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 RNU6-928P-201ENST00000516876 104 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 RNU6-430P-201ENST00000517078 107 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AP000867.2-201ENST00000532468 320 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC006504.3-201ENST00000586818 523 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC068790.2-201ENST00000602601 557 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC174048.1-201ENST00000603389 144 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC098826.3-201ENST00000603823 466 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC136601.2-201ENST00000604356 474 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC007363.1-201ENST00000604736 620 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC012468.1-201ENST00000604888 430 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LDB1Q86U70 AL365204.3-201ENST00000612448 685 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AL589743.7-201ENST00000612637 233 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC011939.3-201ENST00000613686 466 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 AC091834.1-201ENST00000614543 472 ntBASIC3.09□□□□□ -1.91
LDB1Q86U70 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB1Q86U70 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LDB1Q86U70 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB1Q86U70 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
LDB1Q86U70 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
LDB1Q86U70 Y_RNA.194-201ENST00000363985 102 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 RNU6-946P-201ENST00000383878 107 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 Y_RNA.436-201ENST00000384097 102 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AC010099.1-201ENST00000455434 375 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC109925.1-201ENST00000478069 331 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB1Q86U70 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC007182.2-201ENST00000489251 402 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 RNU6-1220P-201ENST00000517126 108 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC090572.1-201ENST00000519251 160 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AP003072.2-201ENST00000527756 676 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LDB1Q86U70 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AL391840.1-201ENST00000571144 367 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC073648.5-201ENST00000603502 305 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AL161798.1-201ENST00000604630 131 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC107294.1-201ENST00000609524 467 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AC005332.10-201ENST00000612725 619 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC099842.1-201ENST00000619919 596 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.08□□□□□ -1.92
LDB1Q86U70 AC233263.6-201ENST00000631132 1963 ntBASIC3.08□□□□□ -1.92
LDB1Q86U70 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LDB1Q86U70 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
LDB1Q86U70 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LDB1Q86U70 RNU6-270P-201ENST00000364131 105 ntBASIC3.07□□□□□ -1.92
LDB1Q86U70 SNORA14A-201ENST00000364773 135 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms