Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
E4F1Q66K89 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
E4F1Q66K89 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
E4F1Q66K89 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 RNU6-593P-201ENST00000364716 112 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 RNU6-45P-201ENST00000384471 107 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.43□□□□□ -1.7
E4F1Q66K89 AC113618.1-201ENST00000416747 285 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.43□□□□□ -1.7
E4F1Q66K89 MTND3P2-201ENST00000438452 342 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AC006011.1-201ENST00000442758 349 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AL137792.2-201ENST00000443484 235 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
E4F1Q66K89 AC116337.1-201ENST00000509680 687 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 RNU1-54P-201ENST00000517181 120 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AC022634.1-201ENST00000520765 532 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 AC025423.5-201ENST00000550230 219 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
E4F1Q66K89 AL355836.1-201ENST00000555951 870 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 MTCO3P23-201ENST00000561363 289 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.43□□□□□ -1.7
E4F1Q66K89 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.43□□□□□ -1.7
E4F1Q66K89 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.43□□□□□ -1.7
E4F1Q66K89 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
E4F1Q66K89 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.43□□□□□ -1.7
E4F1Q66K89 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
E4F1Q66K89 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.43□□□□□ -1.7
E4F1Q66K89 UBE3AP2-201ENST00000429033 2259 ntBASIC4.43□□□□□ -1.7
E4F1Q66K89 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
E4F1Q66K89 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
E4F1Q66K89 AC139713.2-214ENST00000642059 1811 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 MFSD8-242ENST00000641690 4199 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 Y_RNA.28-201ENST00000362554 111 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RNA5SP235-201ENST00000365411 114 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 SNORA36C-201ENST00000384289 132 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 Y_RNA.473-201ENST00000384333 102 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 MIR124-3-201ENST00000384866 87 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AL133270.1-201ENST00000402635 279 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RPL21P90-201ENST00000415692 466 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.42□□□□□ -1.7
E4F1Q66K89 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
E4F1Q66K89 RPL7P37-201ENST00000425095 738 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 TXNP1-201ENST00000441872 371 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RPS29P33-201ENST00000456717 146 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RPL37P6-201ENST00000460682 294 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RN7SL610P-201ENST00000463845 291 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC231760.1-201ENST00000498002 260 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC026726.1-201ENST00000512859 601 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 SNORA31.3-201ENST00000516029 96 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RNU6-1046P-201ENST00000516538 107 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 RANP9-201ENST00000519957 271 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.42□□□□□ -1.7
E4F1Q66K89 CYCSP27-201ENST00000527643 293 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.42□□□□□ -1.7
E4F1Q66K89 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.42□□□□□ -1.7
E4F1Q66K89 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.42□□□□□ -1.7
E4F1Q66K89 AC022968.1-201ENST00000567372 442 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.42□□□□□ -1.7
E4F1Q66K89 AC025946.2-201ENST00000603398 234 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AP000346.3-201ENST00000622821 210 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
E4F1Q66K89 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.42□□□□□ -1.7
E4F1Q66K89 MTND4P1-201ENST00000457501 1466 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
E4F1Q66K89 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
E4F1Q66K89 HSPA8P1-201ENST00000425843 1833 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AC009812.4-201ENST00000569134 1805 ntBASIC4.42□□□□□ -1.7
E4F1Q66K89 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
E4F1Q66K89 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
E4F1Q66K89 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.41□□□□□ -1.7
E4F1Q66K89 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 RNU5A-1-201ENST00000362698 116 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 RNU6-1303P-201ENST00000364841 107 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 U3.22-201ENST00000391120 215 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.41□□□□□ -1.7
E4F1Q66K89 AL358472.1-201ENST00000431295 329 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.41□□□□□ -1.7
E4F1Q66K89 HSFY6P-201ENST00000445573 403 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AC008264.1-201ENST00000447612 367 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.41□□□□□ -1.7
E4F1Q66K89 RPL21P41-201ENST00000459863 264 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AL049874.1-201ENST00000489560 388 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 MLLT10P2-201ENST00000506434 249 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AC009901.1-201ENST00000506703 541 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 PTP4A1P4-201ENST00000512479 322 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 RNU6-914P-201ENST00000516749 109 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.41□□□□□ -1.7
E4F1Q66K89 AC026371.1-201ENST00000551867 419 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
E4F1Q66K89 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.41□□□□□ -1.7
E4F1Q66K89 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.41□□□□□ -1.7
E4F1Q66K89 AC002044.1-201ENST00000606707 158 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AC009229.3-201ENST00000608056 282 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 AC092608.2-201ENST00000624427 218 ntBASIC4.41□□□□□ -1.7
E4F1Q66K89 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms