Protein–RNA interactions for Protein: Q3MHD2

LSM12, Protein LSM12 homolog, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12Q3MHD2 RPL36AP13-201ENST00000457490 317 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 RNU7-59P-201ENST00000459101 61 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC116655.1-201ENST00000508324 901 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 RNA5SP519-201ENST00000516480 119 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 RNU6-64P-201ENST00000517119 105 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC023442.1-201ENST00000531247 422 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 MIR4293-201ENST00000584305 78 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC018462.2-201ENST00000605375 395 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AC100812.1-201ENST00000607622 580 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 MIR486-1-201ENST00000612171 68 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 FAM27D1-201ENST00000612308 341 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AL590099.1-201ENST00000615276 138 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 TPTE2P4-201ENST00000258589 1605 ntBASIC3.98□□□□□ -1.77
LSM12Q3MHD2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LSM12Q3MHD2 AL139811.1-201ENST00000424779 2299 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-562P-201ENST00000362731 107 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-1287P-201ENST00000362914 107 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-490P-201ENST00000362985 107 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNA5SP391-201ENST00000363456 119 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 Y_RNA.389-201ENST00000383924 113 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-472P-201ENST00000384299 107 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-1060P-201ENST00000384664 107 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-278P-201ENST00000390945 109 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-823P-201ENST00000391042 103 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU4-46P-201ENST00000410818 138 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RHEBP3-201ENST00000411920 351 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RPL30P2-201ENST00000414021 291 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RPL7P37-201ENST00000425095 738 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 COX6CP15-201ENST00000426313 211 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 SNAP23P1-201ENST00000433229 246 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC116533.1-201ENST00000459748 321 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC104472.2-201ENST00000469035 601 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 TBCAP3-201ENST00000512475 312 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-408P-201ENST00000515910 100 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNU6-798P-201ENST00000516912 103 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 TRAV8-5-201ENST00000537369 341 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AL133271.1-201ENST00000538229 291 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC090115.3-201ENST00000553218 849 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AL121576.1-201ENST00000556055 276 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 MIR5692C1-201ENST00000585309 91 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.97□□□□□ -1.77
LSM12Q3MHD2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LSM12Q3MHD2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
LSM12Q3MHD2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
LSM12Q3MHD2 ZNF734P-201ENST00000419494 1534 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
LSM12Q3MHD2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
LSM12Q3MHD2 RNA5SP505-201ENST00000364748 108 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 SNORD82-201ENST00000365530 70 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 AC069218.2-201ENST00000411665 344 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM12Q3MHD2 AC243428.1-201ENST00000421099 264 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 AC236972.1-201ENST00000433225 199 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 RPL36AP6-201ENST00000435770 321 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 HSFY6P-201ENST00000445573 403 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM12Q3MHD2 RPL23AP24-201ENST00000458203 385 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.96□□□□□ -1.78
LSM12Q3MHD2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 RBBP4P6-201ENST00000508098 202 ntBASIC3.96□□□□□ -1.78
LSM12Q3MHD2 RNA5SP49-201ENST00000516450 115 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms