| NDUFA9 | Q16795 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNU6-64P-201 | ENST00000517119 | 105 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNU4ATAC17P-201 | ENST00000517272 | 120 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC018541.1-202 | ENST00000518687 | 584 nt | TSL 4 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC025524.2-207 | ENST00000520097 | 506 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC093012.1-202 | ENST00000549403 | 582 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC128657.1-201 | ENST00000549459 | 145 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | LINC02309-201 | ENST00000553679 | 207 nt | TSL 3 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC026771.1-201 | ENST00000564672 | 415 nt | TSL 2 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC008739.2-201 | ENST00000597006 | 317 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC136601.2-201 | ENST00000604356 | 474 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MACROD2-IT1-202 | ENST00000605675 | 575 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | OR10AB1P-201 | ENST00000609613 | 938 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | SNHG22-203 | ENST00000617833 | 660 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC012593.1-211 | ENST00000625996 | 799 nt | TSL 5 BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | PSMD5-AS1-215 | ENST00000640622 | 205 nt | BASIC | 2.5 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | GPBP1-201 | ENST00000264779 | 1786 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | ZBTB26-202 | ENST00000373656 | 4443 nt | APPRIS P1 TSL 1 (best) BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | HSPA4L-202 | ENST00000505726 | 2639 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | SNORD62.1-201 | ENST00000362541 | 86 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | Y_RNA.46-201 | ENST00000362695 | 102 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL390198.1-201 | ENST00000376445 | 320 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL356057.3-201 | ENST00000402607 | 340 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC062039.1-201 | ENST00000414394 | 565 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL162414.1-201 | ENST00000426204 | 744 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | ZNF863P-201 | ENST00000426746 | 417 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | BX005214.1-201 | ENST00000427327 | 476 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC244035.1-201 | ENST00000430042 | 390 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL139289.1-201 | ENST00000436713 | 731 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC006458.1-201 | ENST00000445093 | 653 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL731568.1-201 | ENST00000445111 | 434 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC020550.1-201 | ENST00000447385 | 163 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL109933.2-201 | ENST00000452651 | 260 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AP000705.1-201 | ENST00000454567 | 350 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RPL12P25-201 | ENST00000455592 | 494 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC092264.1-201 | ENST00000456002 | 713 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC093110.1-201 | ENST00000456363 | 602 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | ANKRD7-204 | ENST00000477532 | 744 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC126182.1-201 | ENST00000478134 | 357 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RPL23AP41-201 | ENST00000484754 | 458 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | LINC02198-201 | ENST00000504280 | 810 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MTND5P13-201 | ENST00000513046 | 1079 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC116347.2-201 | ENST00000514912 | 523 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | ATP5F1P5-201 | ENST00000526403 | 760 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | DEFB108A-201 | ENST00000530110 | 222 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MGST1-215 | ENST00000540056 | 546 nt | TSL 3 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC009094.1-201 | ENST00000564443 | 426 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC002400.1-201 | ENST00000569310 | 726 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MIR3162-201 | ENST00000581818 | 82 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AP000403.1-201 | ENST00000603349 | 851 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AP000787.2-201 | ENST00000604432 | 568 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC034229.4-201 | ENST00000607861 | 441 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC103710.1-201 | ENST00000610003 | 901 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC245517.5-201 | ENST00000611529 | 162 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC004852.3-201 | ENST00000614131 | 326 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL590491.2-201 | ENST00000614608 | 499 nt | TSL 5 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | SOX2OT_exon1.1-201 | ENST00000614902 | 232 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | HOTTIP_4.1-201 | ENST00000618195 | 165 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC017037.3-201 | ENST00000625016 | 472 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC092192.1-201 | ENST00000633154 | 1018 nt | BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | ARHGAP11A-207 | ENST00000565905 | 3318 nt | TSL 2 BASIC | 2.49 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC022336.2-201 | ENST00000568966 | 2538 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | OR4M1-202 | ENST00000641200 | 3493 nt | APPRIS P1 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNU5A-8P-201 | ENST00000364102 | 114 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL139039.1-201 | ENST00000401900 | 692 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL359634.1-202 | ENST00000404721 | 284 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | BTF3L4P3-201 | ENST00000418879 | 476 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL645937.4-201 | ENST00000419702 | 389 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC079799.1-201 | ENST00000430696 | 331 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RPL37P21-201 | ENST00000435890 | 276 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MTCYBP39-201 | ENST00000437562 | 491 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | KRTAP19-11P-201 | ENST00000439851 | 104 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | LINC00354-202 | ENST00000440860 | 376 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC011816.1-201 | ENST00000441346 | 546 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MTND5P2-201 | ENST00000442927 | 1142 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | GDI2P2-201 | ENST00000445131 | 608 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RNU7-23P-201 | ENST00000459465 | 62 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | GPX5-203 | ENST00000469384 | 428 nt | TSL 1 (best) BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | RPS27P26-201 | ENST00000494583 | 239 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | TEMN3-AS1-201 | ENST00000510211 | 401 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC084116.3-201 | ENST00000519123 | 429 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC090802.1-201 | ENST00000520870 | 445 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC100870.1-201 | ENST00000522035 | 505 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AP000462.3-201 | ENST00000545593 | 330 nt | TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | IGKV1-33-202 | ENST00000558152 | 324 nt | APPRIS ALT2 TSL 5 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC012379.1-201 | ENST00000558304 | 406 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MTATP6P24-201 | ENST00000576835 | 677 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | AC069114.1-201 | ENST00000580927 | 287 nt | TSL 2 BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | MIR4293-201 | ENST00000584305 | 78 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | DPPA3P3-201 | ENST00000603842 | 430 nt | BASIC | 2.48 | □□□□□ -2.01 | | |
| NDUFA9 | Q16795 | FTX_3.1-201 | ENST00000610451 | 147 nt | BASIC | 2.48 | □□□□□ -2.01 | | |