Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
CDH11P55287 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AL158209.2-201ENST00000619266 216 ntBASIC3.01□□□□□ -1.93
CDH11P55287 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC091953.5-201ENST00000622919 233 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 AC068137.3-201ENST00000639191 341 ntBASIC3.01□□□□□ -1.93
CDH11P55287 AC073869.6-201ENST00000640656 341 ntBASIC3.01□□□□□ -1.93
CDH11P55287 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 OR5H6-203ENST00000642105 978 ntBASIC3.01□□□□□ -1.93
CDH11P55287 OR4G2P-202ENST00000641004 1759 ntBASIC3.01□□□□□ -1.93
CDH11P55287 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH11P55287 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH11P55287 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CDH11P55287 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.01□□□□□ -1.93
CDH11P55287 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDH11P55287 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 AC007256.1-201ENST00000392253 2765 ntBASIC3□□□□□ -1.93
CDH11P55287 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDH11P55287 Y_RNA.6-201ENST00000362350 114 ntBASIC3□□□□□ -1.93
CDH11P55287 RNU6-525P-201ENST00000363685 104 ntBASIC3□□□□□ -1.93
CDH11P55287 RNU6-188P-201ENST00000364207 107 ntBASIC3□□□□□ -1.93
CDH11P55287 RNY1P12-201ENST00000364251 105 ntBASIC3□□□□□ -1.93
CDH11P55287 SMIM11P1-201ENST00000369586 178 ntBASIC3□□□□□ -1.93
CDH11P55287 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
CDH11P55287 SNORD17-201ENST00000390930 237 ntBASIC3□□□□□ -1.93
CDH11P55287 RPL17P50-201ENST00000396131 546 ntBASIC3□□□□□ -1.93
CDH11P55287 RNA5SP129-201ENST00000410276 118 ntBASIC3□□□□□ -1.93
CDH11P55287 RNU4-55P-201ENST00000410731 137 ntBASIC3□□□□□ -1.93
CDH11P55287 RPL32P35-201ENST00000415214 394 ntBASIC3□□□□□ -1.93
CDH11P55287 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3□□□□□ -1.93
CDH11P55287 AL353193.1-201ENST00000421444 268 ntBASIC3□□□□□ -1.93
CDH11P55287 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3□□□□□ -1.93
CDH11P55287 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 AC091390.3-201ENST00000426478 338 ntBASIC3□□□□□ -1.93
CDH11P55287 AC073464.1-201ENST00000429823 534 ntBASIC3□□□□□ -1.93
CDH11P55287 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
CDH11P55287 AC115115.1-201ENST00000449927 248 ntBASIC3□□□□□ -1.93
CDH11P55287 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 RPS20P20-201ENST00000460498 340 ntBASIC3□□□□□ -1.93
CDH11P55287 RPL21P104-201ENST00000464143 478 ntBASIC3□□□□□ -1.93
CDH11P55287 RPS4XP13-201ENST00000483219 789 ntBASIC3□□□□□ -1.93
CDH11P55287 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 AC023194.1-201ENST00000493084 308 ntBASIC3□□□□□ -1.93
CDH11P55287 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDH11P55287 AL359273.1-201ENST00000510918 627 ntBASIC3□□□□□ -1.93
CDH11P55287 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
CDH11P55287 RNU7-51P-201ENST00000516560 62 ntBASIC3□□□□□ -1.93
CDH11P55287 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 HMGB1P41-201ENST00000520234 440 ntBASIC3□□□□□ -1.93
CDH11P55287 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 AL355836.1-201ENST00000555951 870 ntBASIC3□□□□□ -1.93
CDH11P55287 SUB1P2-201ENST00000556401 297 ntBASIC3□□□□□ -1.93
CDH11P55287 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3□□□□□ -1.93
CDH11P55287 AC024619.4-201ENST00000580924 316 ntBASIC3□□□□□ -1.93
CDH11P55287 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 AC025449.1-201ENST00000603896 529 ntBASIC3□□□□□ -1.93
CDH11P55287 AL121992.2-201ENST00000606262 256 ntBASIC3□□□□□ -1.93
CDH11P55287 AC007684.1-201ENST00000609671 477 ntBASIC3□□□□□ -1.93
CDH11P55287 AC073534.2-201ENST00000620377 381 ntBASIC3□□□□□ -1.93
CDH11P55287 AL359880.1-201ENST00000621879 266 ntBASIC3□□□□□ -1.93
CDH11P55287 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3□□□□□ -1.93
CDH11P55287 MIR6863-201ENST00000636112 90 ntBASIC3□□□□□ -1.93
CDH11P55287 AL137003.2-201ENST00000606924 2538 ntBASIC3□□□□□ -1.93
CDH11P55287 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3□□□□□ -1.93
CDH11P55287 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH11P55287 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.99□□□□□ -1.93
CDH11P55287 Y_RNA.1-201ENST00000352915 104 ntBASIC2.99□□□□□ -1.93
CDH11P55287 RNA5SP295-201ENST00000362655 121 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CDH11P55287 SNORA9-201ENST00000384215 133 ntBASIC2.99□□□□□ -1.93
CDH11P55287 MIR1-2-201ENST00000384961 85 ntBASIC2.99□□□□□ -1.93
CDH11P55287 MTCO3P40-201ENST00000392516 676 ntBASIC2.99□□□□□ -1.93
CDH11P55287 RPS4XP8-201ENST00000402039 771 ntBASIC2.99□□□□□ -1.93
CDH11P55287 NDUFS5P1-201ENST00000405668 289 ntBASIC2.99□□□□□ -1.93
CDH11P55287 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH11P55287 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH11P55287 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH11P55287 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH11P55287 RAC1P6-201ENST00000423911 575 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AC093106.2-201ENST00000428212 385 ntBASIC2.99□□□□□ -1.93
CDH11P55287 MTATP6P16-201ENST00000434543 526 ntBASIC2.99□□□□□ -1.93
CDH11P55287 RPS20P5-201ENST00000434808 360 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AC002486.1-201ENST00000435098 391 ntBASIC2.99□□□□□ -1.93
CDH11P55287 HMGB1P12-201ENST00000438594 598 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.99□□□□□ -1.93
CDH11P55287 AC092473.1-201ENST00000441098 221 ntBASIC2.99□□□□□ -1.93
CDH11P55287 PSPHP1-201ENST00000450062 261 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AC093899.1-201ENST00000457984 376 ntBASIC2.99□□□□□ -1.93
CDH11P55287 RPL7P5-201ENST00000471472 736 ntBASIC2.99□□□□□ -1.93
CDH11P55287 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.99□□□□□ -1.93
CDH11P55287 AL049874.1-201ENST00000489560 388 ntBASIC2.99□□□□□ -1.93
CDH11P55287 ARL4AP2-201ENST00000507378 601 ntBASIC2.99□□□□□ -1.93
CDH11P55287 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms