Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SPA17P1-201ENST00000416656 452 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
MTHFRP42898 AC016907.1-201ENST00000419483 435 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.2□□□□□ -1.9
MTHFRP42898 TPTE2P5-203ENST00000458118 728 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC010631.1-201ENST00000474150 156 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 RN7SL432P-201ENST00000484057 298 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.2□□□□□ -1.9
MTHFRP42898 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.2□□□□□ -1.9
MTHFRP42898 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.2□□□□□ -1.9
MTHFRP42898 TTC39CP1-201ENST00000512513 755 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.2□□□□□ -1.9
MTHFRP42898 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.2□□□□□ -1.9
MTHFRP42898 AC107934.1-201ENST00000522215 217 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
MTHFRP42898 AP003181.2-201ENST00000528941 181 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AMZ2P1-203ENST00000565833 850 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 HMGB1P6-201ENST00000569046 646 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 MIR4435-1-201ENST00000582552 80 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AL359999.1-201ENST00000604513 294 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 BX664608.1-201ENST00000610519 487 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC138749.5-201ENST00000611461 208 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC013476.2-201ENST00000614456 459 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 SDR42E1P2-201ENST00000614861 481 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC116165.2-201ENST00000616705 206 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 AC092140.2-201ENST00000618027 521 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 OR5H6-203ENST00000642105 978 ntBASIC3.2□□□□□ -1.9
MTHFRP42898 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
MTHFRP42898 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MTHFRP42898 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 Y_RNA.318-201ENST00000365131 97 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 SNORD67-201ENST00000390833 111 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.19□□□□□ -1.9
MTHFRP42898 MTND1P28-201ENST00000435623 950 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 KATNBL1P3-201ENST00000443475 909 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.19□□□□□ -1.9
MTHFRP42898 RPS20P20-201ENST00000460498 340 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
MTHFRP42898 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC009901.1-201ENST00000506703 541 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC022878.1-201ENST00000530684 149 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.19□□□□□ -1.9
MTHFRP42898 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.19□□□□□ -1.9
MTHFRP42898 MIR4319-201ENST00000577285 85 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 MIR3118-1-201ENST00000581787 76 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 MIR4293-201ENST00000584305 78 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 KC877982.1-201ENST00000602313 470 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC068276.1-201ENST00000605793 379 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.19□□□□□ -1.9
MTHFRP42898 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC103710.1-201ENST00000610003 901 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC131902.3-201ENST00000611767 581 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 AC009878.1-201ENST00000621819 340 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC091953.2-201ENST00000623979 160 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 AC138915.1-201ENST00000565427 1685 ntBASIC3.19□□□□□ -1.9
MTHFRP42898 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MTHFRP42898 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
MTHFRP42898 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
MTHFRP42898 U3.11-201ENST00000364476 212 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 RNY3P13-201ENST00000365542 102 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
MTHFRP42898 SNORD116-9-201ENST00000384000 95 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SNORD116-3-201ENST00000384287 95 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SNORD116-7-201ENST00000384404 95 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SNORD116-5-201ENST00000384462 95 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 RN7SKP140-201ENST00000411196 284 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 ELOCP17-201ENST00000414751 326 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.18□□□□□ -1.9
MTHFRP42898 MORF4L1P6-201ENST00000418771 268 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 OOSP1P1-201ENST00000423265 274 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AL512844.2-201ENST00000433990 593 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 COX6CP2-201ENST00000444980 225 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AL590639.1-201ENST00000456484 337 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MTHFRP42898 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.18□□□□□ -1.9
MTHFRP42898 AC091965.2-201ENST00000512324 613 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
MTHFRP42898 NRON-201ENST00000517270 370 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AP003122.4-201ENST00000530980 758 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AC007115.1-201ENST00000546853 234 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AC107016.2-201ENST00000547968 190 ntBASIC3.18□□□□□ -1.9
MTHFRP42898 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.18□□□□□ -1.9
MTHFRP42898 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.18□□□□□ -1.9
MTHFRP42898 HMGN1P30-201ENST00000589286 268 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms