Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC104763.2-201ENST00000604179 382 ntBASIC1.89□□□□□ -2.11
CD28P10747 AC079395.3-201ENST00000615161 484 ntBASIC1.89□□□□□ -2.11
CD28P10747 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CD28P10747 AL359757.2-201ENST00000624309 274 ntBASIC1.89□□□□□ -2.11
CD28P10747 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CD28P10747 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CD28P10747 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CD28P10747 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.88□□□□□ -2.11
CD28P10747 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.88□□□□□ -2.11
CD28P10747 ZNF29P-201ENST00000225587 168 ntBASIC1.88□□□□□ -2.11
CD28P10747 RNU6-433P-201ENST00000363216 104 ntBASIC1.88□□□□□ -2.11
CD28P10747 RNA5SP456-201ENST00000364002 114 ntBASIC1.88□□□□□ -2.11
CD28P10747 SNORA4.1-201ENST00000364263 144 ntBASIC1.88□□□□□ -2.11
CD28P10747 RNU1-91P-201ENST00000364746 163 ntBASIC1.88□□□□□ -2.11
CD28P10747 RN7SKP226-201ENST00000364912 300 ntBASIC1.88□□□□□ -2.11
CD28P10747 MIR19A-201ENST00000384878 82 ntBASIC1.88□□□□□ -2.11
CD28P10747 MIR767-201ENST00000390228 109 ntBASIC1.88□□□□□ -2.11
CD28P10747 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CD28P10747 AC007064.1-201ENST00000412238 351 ntBASIC1.88□□□□□ -2.11
CD28P10747 AL135786.1-201ENST00000415892 214 ntBASIC1.88□□□□□ -2.11
CD28P10747 UBE2FP1-201ENST00000416536 447 ntBASIC1.88□□□□□ -2.11
CD28P10747 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 RPS15AP7-201ENST00000439294 405 ntBASIC1.88□□□□□ -2.11
CD28P10747 MTND3P1-201ENST00000441336 220 ntBASIC1.88□□□□□ -2.11
CD28P10747 DDX3P2-201ENST00000446138 111 ntBASIC1.88□□□□□ -2.11
CD28P10747 PTENP1-201ENST00000447117 1215 ntBASIC1.88□□□□□ -2.11
CD28P10747 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.88□□□□□ -2.11
CD28P10747 USP9YP25-201ENST00000457708 443 ntBASIC1.88□□□□□ -2.11
CD28P10747 MRPS17P3-201ENST00000465453 385 ntBASIC1.88□□□□□ -2.11
CD28P10747 AP000852.1-201ENST00000472460 573 ntBASIC1.88□□□□□ -2.11
CD28P10747 RPS15AP36-201ENST00000492022 382 ntBASIC1.88□□□□□ -2.11
CD28P10747 RPS29P21-201ENST00000496272 170 ntBASIC1.88□□□□□ -2.11
CD28P10747 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.88□□□□□ -2.11
CD28P10747 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.88□□□□□ -2.11
CD28P10747 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.88□□□□□ -2.11
CD28P10747 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.88□□□□□ -2.11
CD28P10747 SCARNA1-201ENST00000517138 166 ntBASIC1.88□□□□□ -2.11
CD28P10747 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.88□□□□□ -2.11
CD28P10747 MTCO2P15-201ENST00000532655 656 ntBASIC1.88□□□□□ -2.11
CD28P10747 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.88□□□□□ -2.11
CD28P10747 AC123904.3-201ENST00000547218 814 ntBASIC1.88□□□□□ -2.11
CD28P10747 AC009063.1-201ENST00000563342 702 ntBASIC1.88□□□□□ -2.11
CD28P10747 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.88□□□□□ -2.11
CD28P10747 AC025281.1-201ENST00000567026 265 ntBASIC1.88□□□□□ -2.11
CD28P10747 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.88□□□□□ -2.11
CD28P10747 AC060771.1-201ENST00000582031 164 ntBASIC1.88□□□□□ -2.11
CD28P10747 MIR5092-201ENST00000583139 88 ntBASIC1.88□□□□□ -2.11
CD28P10747 HMGN2P15-201ENST00000585707 270 ntBASIC1.88□□□□□ -2.11
CD28P10747 TPMTP1-201ENST00000592307 737 ntBASIC1.88□□□□□ -2.11
CD28P10747 AC021171.1-201ENST00000603137 706 ntBASIC1.88□□□□□ -2.11
CD28P10747 AL357094.1-201ENST00000603845 844 ntBASIC1.88□□□□□ -2.11
CD28P10747 BCRP9-201ENST00000605312 388 ntBASIC1.88□□□□□ -2.11
CD28P10747 AP000484.1-201ENST00000620067 1252 ntBASIC1.88□□□□□ -2.11
CD28P10747 UCA1.1-201ENST00000620952 75 ntBASIC1.88□□□□□ -2.11
CD28P10747 AC012150.2-201ENST00000621300 544 ntBASIC1.88□□□□□ -2.11
CD28P10747 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
CD28P10747 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.88□□□□□ -2.11
CD28P10747 U2.21-201ENST00000637295 81 ntBASIC1.88□□□□□ -2.11
CD28P10747 AC006927.4-201ENST00000639187 543 ntBASIC1.88□□□□□ -2.11
CD28P10747 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 AC069528.2-201ENST00000624849 1991 ntBASIC1.87□□□□□ -2.11
CD28P10747 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
CD28P10747 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
CD28P10747 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CD28P10747 RNU6-931P-201ENST00000363850 107 ntBASIC1.87□□□□□ -2.11
CD28P10747 RNU6-157P-201ENST00000383957 107 ntBASIC1.87□□□□□ -2.11
CD28P10747 RNU6-925P-201ENST00000384629 104 ntBASIC1.87□□□□□ -2.11
CD28P10747 MIR320C1-201ENST00000408566 88 ntBASIC1.87□□□□□ -2.11
CD28P10747 AL359704.1-201ENST00000411586 781 ntBASIC1.87□□□□□ -2.11
CD28P10747 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.87□□□□□ -2.11
CD28P10747 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.87□□□□□ -2.11
CD28P10747 USP9YP13-201ENST00000417797 480 ntBASIC1.87□□□□□ -2.11
CD28P10747 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.87□□□□□ -2.11
CD28P10747 AC007919.1-201ENST00000429380 217 ntBASIC1.87□□□□□ -2.11
CD28P10747 AC092427.1-202ENST00000430569 476 ntBASIC1.87□□□□□ -2.11
CD28P10747 AL139415.2-201ENST00000431968 163 ntBASIC1.87□□□□□ -2.11
CD28P10747 USP12PX-201ENST00000432383 1057 ntBASIC1.87□□□□□ -2.11
CD28P10747 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 AL117351.1-201ENST00000438864 766 ntBASIC1.87□□□□□ -2.11
CD28P10747 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.87□□□□□ -2.11
CD28P10747 FAM103A2P-201ENST00000444122 354 ntBASIC1.87□□□□□ -2.11
CD28P10747 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CD28P10747 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.87□□□□□ -2.11
CD28P10747 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.87□□□□□ -2.11
CD28P10747 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.87□□□□□ -2.11
CD28P10747 snoU13.26-201ENST00000459452 105 ntBASIC1.87□□□□□ -2.11
CD28P10747 RPL36AP51-201ENST00000487216 318 ntBASIC1.87□□□□□ -2.11
CD28P10747 AL160314.1-201ENST00000490836 438 ntBASIC1.87□□□□□ -2.11
CD28P10747 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms