Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A2P08572 AC007742.1-201ENST00000425789 329 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 HMGB1P27-201ENST00000431429 603 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 ELOCP26-201ENST00000436067 329 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 MTCO1P42-201ENST00000457379 726 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A2P08572 SETP11-201ENST00000473027 690 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AC069528.1-202ENST00000482888 637 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 SUMO2P5-201ENST00000506790 245 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 RNA5SP480-201ENST00000516840 109 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AC010376.1-201ENST00000522101 334 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
COL4A2P08572 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.65□□□□□ -2.15
COL4A2P08572 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.65□□□□□ -2.15
COL4A2P08572 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AC245036.5-201ENST00000596330 847 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.65□□□□□ -2.15
COL4A2P08572 AC099785.1-201ENST00000605697 437 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 RNU6-1192P-201ENST00000612197 107 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 RNU6-489P-201ENST00000618289 107 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AP003485.1-201ENST00000625093 753 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 AL109809.4-201ENST00000603520 2185 ntBASIC1.65□□□□□ -2.15
COL4A2P08572 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
COL4A2P08572 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
COL4A2P08572 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
COL4A2P08572 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A2P08572 RNU6-1155P-201ENST00000363554 107 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 RNU6-707P-201ENST00000364647 95 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AL079342.2-201ENST00000403367 482 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 MTATP6P27-201ENST00000416987 621 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AL590233.1-201ENST00000430017 456 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 RNU6-420P-201ENST00000458780 107 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC090096.1-201ENST00000489168 390 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 RPS29P20-201ENST00000489592 171 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
COL4A2P08572 AC114322.1-201ENST00000506771 926 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 RPL37P25-201ENST00000507308 276 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.64□□□□□ -2.15
COL4A2P08572 RNU6-56P-201ENST00000516986 93 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC087808.1-201ENST00000520501 361 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 CASP1P1-201ENST00000526345 212 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A2P08572 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A2P08572 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A2P08572 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.64□□□□□ -2.15
COL4A2P08572 AC126365.2-201ENST00000580630 379 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A2P08572 AC243773.3-201ENST00000613270 256 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC007275.1-201ENST00000621243 671 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 AC090617.7-201ENST00000623952 126 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A2P08572 Z82195.2-201ENST00000612348 18351 ntBASIC1.64□□□□□ -2.15
COL4A2P08572 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL4A2P08572 RNA5SP393-201ENST00000363423 117 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 RNA5SP139-201ENST00000364340 117 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A2P08572 AC069282.1-201ENST00000411911 526 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AL356867.1-201ENST00000429623 299 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 MTCYBP45-201ENST00000435243 565 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 BNIP3P2-201ENST00000441221 577 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A2P08572 TPT1P14-201ENST00000448018 505 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A2P08572 snoU13.28-201ENST00000459235 104 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC108734.3-201ENST00000481241 1165 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC092902.1-201ENST00000486999 259 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A2P08572 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC026414.1-201ENST00000504046 698 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC022483.1-201ENST00000514020 567 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A2P08572 AC022861.1-201ENST00000522981 663 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC125611.1-201ENST00000549563 229 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC007375.1-201ENST00000554513 578 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 MIR5694-201ENST00000581190 76 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC105224.1-201ENST00000587055 421 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 HSPE1P7-201ENST00000604681 321 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 DUXAP10-204ENST00000612052 616 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC027309.3-201ENST00000623419 351 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A2P08572 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
COL4A2P08572 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 RNU6-1027P-201ENST00000383998 107 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 MIR135A2-201ENST00000384854 100 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 RNU6-174P-201ENST00000410406 106 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC007435.1-201ENST00000421086 415 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 MRPS36P1-201ENST00000421291 307 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms