Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AL161729.4-201ENST00000604650 476 ntBASIC1.35□□□□□ -2.19
HMGN1P05114 AC091953.2-201ENST00000623979 160 ntBASIC1.35□□□□□ -2.19
HMGN1P05114 AC092192.1-201ENST00000633154 1018 ntBASIC1.35□□□□□ -2.19
HMGN1P05114 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HMGN1P05114 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HMGN1P05114 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
HMGN1P05114 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.34□□□□□ -2.19
HMGN1P05114 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 ZNF29P-201ENST00000225587 168 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 RNU6-338P-201ENST00000383888 105 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 AL627390.1-201ENST00000396055 340 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGN1P05114 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGN1P05114 AC092393.1-201ENST00000439625 742 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 RPL26P6-201ENST00000440913 438 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 RPS20P22-201ENST00000473700 357 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMGN1P05114 RNU6-362P-201ENST00000516736 90 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 snoZ278.1-201ENST00000517059 112 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMGN1P05114 AK6P1-201ENST00000540219 478 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 SUB1P3-201ENST00000564581 315 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 AC007151.1-201ENST00000572774 483 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 MIR4765-201ENST00000585007 77 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.34□□□□□ -2.19
HMGN1P05114 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.34□□□□□ -2.19
HMGN1P05114 AC091834.1-201ENST00000614543 472 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 STMN1P1-201ENST00000617809 440 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 Z99571.1-201ENST00000636677 394 ntBASIC1.34□□□□□ -2.19
HMGN1P05114 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGN1P05114 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 SNORA70B-201ENST00000384210 135 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGN1P05114 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGN1P05114 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN1P05114 Z82210.1-201ENST00000440037 231 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 BNIP3P2-201ENST00000441221 577 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 HMGN2P10-201ENST00000448085 265 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 DNAJC19P8-201ENST00000452887 259 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN1P05114 MRPS33P3-201ENST00000513456 322 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 RNU6-1256P-201ENST00000516539 103 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN1P05114 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN1P05114 AC079610.2-201ENST00000604818 690 ntBASIC1.33□□□□□ -2.2
HMGN1P05114 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGN1P05114 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGN1P05114 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGN1P05114 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 RNU6-251P-201ENST00000363235 104 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMGN1P05114 MIR504-201ENST00000385065 83 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 PAICSP7-201ENST00000419829 962 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AC092047.1-201ENST00000424997 240 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGN1P05114 VN1R108P-201ENST00000431580 830 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AC241584.1-201ENST00000438469 1241 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 MTND2P29-201ENST00000438595 412 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AC008379.1-201ENST00000463655 464 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 TRBV1-201ENST00000476502 284 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 TRBV12-1-201ENST00000479785 344 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 LARP1BP2-201ENST00000486594 519 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.32□□□□□ -2.2
HMGN1P05114 RNA5SP165-201ENST00000517142 115 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMGN1P05114 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGN1P05114 AC233702.2-202ENST00000562547 291 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN1P05114 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AC007349.4-201ENST00000608114 532 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 MIR6845-201ENST00000613182 61 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 MIR6130-201ENST00000619419 109 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 AP003476.1-201ENST00000623984 516 ntBASIC1.32□□□□□ -2.2
HMGN1P05114 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGN1P05114 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGN1P05114 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HMGN1P05114 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
HMGN1P05114 RNU6-486P-201ENST00000363116 107 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 MIR30A-201ENST00000385092 71 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN1P05114 AL513185.2-201ENST00000425543 193 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 HMGB1P18-201ENST00000438801 619 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 THAP5P1-201ENST00000439089 262 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGN1P05114 RFC5P1-201ENST00000454419 874 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 RNA5SP57-201ENST00000459463 123 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 RPL31P58-201ENST00000469001 379 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 SNORA4.4-201ENST00000515921 135 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 SCARNA15.2-201ENST00000516409 127 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.31□□□□□ -2.2
HMGN1P05114 IMMP1LP2-201ENST00000552954 492 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 SNORD53B-201ENST00000577887 78 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 MIR3683-201ENST00000580847 82 ntBASIC1.31□□□□□ -2.2
HMGN1P05114 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN1P05114 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
HMGN1P05114 ATP5F1P6-201ENST00000402768 767 ntBASIC1.3□□□□□ -2.2
HMGN1P05114 OR51A3P-201ENST00000413596 924 ntBASIC1.3□□□□□ -2.2
HMGN1P05114 BOLA3P4-201ENST00000418151 400 ntBASIC1.3□□□□□ -2.2
HMGN1P05114 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms