Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
DDX58O95786 AC022878.1-201ENST00000530684 149 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX58O95786 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX58O95786 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
DDX58O95786 AC112191.3-201ENST00000604371 277 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AL161729.4-201ENST00000604650 476 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AC007619.2-201ENST00000605743 379 ntBASIC3.54□□□□□ -1.84
DDX58O95786 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX58O95786 AC108747.1-201ENST00000609508 535 ntBASIC3.54□□□□□ -1.84
DDX58O95786 AC009878.1-201ENST00000621819 340 ntBASIC3.54□□□□□ -1.84
DDX58O95786 FRG1KP-201ENST00000623592 341 ntBASIC3.54□□□□□ -1.84
DDX58O95786 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
DDX58O95786 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX58O95786 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 RNU6-1284P-201ENST00000363701 100 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RNY4P16-201ENST00000364768 94 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MIR9-1-201ENST00000385198 89 ntBASIC3.53□□□□□ -1.84
DDX58O95786 SNORA48.8-201ENST00000391324 134 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AL360182.1-201ENST00000397433 468 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AL359634.1-202ENST00000404721 284 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RNU2-33P-201ENST00000410344 192 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RNA5SP184-201ENST00000411071 108 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AL592148.1-201ENST00000413568 445 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RPS15AP12-201ENST00000419498 388 ntBASIC3.53□□□□□ -1.84
DDX58O95786 ZNF863P-201ENST00000426746 417 ntBASIC3.53□□□□□ -1.84
DDX58O95786 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 AC098826.1-201ENST00000433943 471 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 COX6CP2-201ENST00000444980 225 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MTND2P4-201ENST00000445034 1004 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MTATP6P26-201ENST00000445926 662 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AL135752.1-201ENST00000479477 471 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RPL23AP94-201ENST00000512518 302 ntBASIC3.53□□□□□ -1.84
DDX58O95786 FABP5P5-201ENST00000515537 406 ntBASIC3.53□□□□□ -1.84
DDX58O95786 RNA5SP290-201ENST00000517133 127 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX58O95786 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX58O95786 MIR4319-201ENST00000577285 85 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MIR4672-201ENST00000583126 81 ntBASIC3.53□□□□□ -1.84
DDX58O95786 BNIP3P8-201ENST00000597863 560 ntBASIC3.53□□□□□ -1.84
DDX58O95786 DPPA3P3-201ENST00000603842 430 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
DDX58O95786 NUTF2P8-201ENST00000604593 363 ntBASIC3.53□□□□□ -1.84
DDX58O95786 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MTND1P37-201ENST00000636562 264 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
DDX58O95786 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
DDX58O95786 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.85
DDX58O95786 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
DDX58O95786 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
DDX58O95786 MIR26A1-201ENST00000362205 77 ntBASIC3.52□□□□□ -1.85
DDX58O95786 RNU6-799P-201ENST00000363567 107 ntBASIC3.52□□□□□ -1.85
DDX58O95786 SNORD115.1-201ENST00000391109 76 ntBASIC3.52□□□□□ -1.85
DDX58O95786 RNA5SP21-201ENST00000410917 96 ntBASIC3.52□□□□□ -1.85
DDX58O95786 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 AC019097.1-201ENST00000424783 735 ntBASIC3.52□□□□□ -1.85
DDX58O95786 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC063976.3-201ENST00000426849 329 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX58O95786 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX58O95786 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX58O95786 AC020550.1-201ENST00000447385 163 ntBASIC3.52□□□□□ -1.85
DDX58O95786 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX58O95786 AP002884.2-201ENST00000471647 395 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.52□□□□□ -1.85
DDX58O95786 AMZ2P1-203ENST00000565833 850 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.52□□□□□ -1.85
DDX58O95786 ZNF861P-201ENST00000588126 639 ntBASIC3.52□□□□□ -1.85
DDX58O95786 RPL12P50-201ENST00000603116 116 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AL035413.2-201ENST00000604801 525 ntBASIC3.52□□□□□ -1.85
DDX58O95786 RNU6-87P-201ENST00000607561 108 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC004852.3-201ENST00000614131 326 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AC006338.1-201ENST00000618453 749 ntBASIC3.52□□□□□ -1.85
DDX58O95786 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX58O95786 AC022336.2-201ENST00000568966 2538 ntBASIC3.52□□□□□ -1.85
DDX58O95786 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX58O95786 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX58O95786 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX58O95786 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX58O95786 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX58O95786 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX58O95786 AC062016.1-201ENST00000355719 319 ntBASIC3.51□□□□□ -1.85
DDX58O95786 RNA5SP139-201ENST00000364340 117 ntBASIC3.51□□□□□ -1.85
DDX58O95786 RNU6-140P-201ENST00000384566 108 ntBASIC3.51□□□□□ -1.85
DDX58O95786 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
DDX58O95786 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX58O95786 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX58O95786 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX58O95786 FCF1P1-201ENST00000432690 571 ntBASIC3.51□□□□□ -1.85
DDX58O95786 AC119618.1-201ENST00000434191 222 ntBASIC3.51□□□□□ -1.85
DDX58O95786 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX58O95786 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms