Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FTX_3.1-201ENST00000610451 147 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 Z99129.2-201ENST00000619967 314 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 AC120349.3-201ENST00000624377 529 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GGPS1O95749 AL136360.1-201ENST00000503377 1900 ntBASIC3.17□□□□□ -1.9
GGPS1O95749 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
GGPS1O95749 API5P2-201ENST00000397055 1498 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GGPS1O95749 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
GGPS1O95749 MIR449A-201ENST00000362113 91 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 RNU5F-7P-201ENST00000363696 115 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AL360182.1-201ENST00000397433 468 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 Y_RNA.608-201ENST00000410647 95 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 RNU2-52P-201ENST00000410680 190 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.16□□□□□ -1.9
GGPS1O95749 AC063976.3-201ENST00000426849 329 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AL365496.1-201ENST00000426885 215 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.16□□□□□ -1.9
GGPS1O95749 AL590365.1-201ENST00000450788 243 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 KATNBL1P6-201ENST00000453433 915 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC109486.1-201ENST00000486833 374 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 RPF2P2-201ENST00000504693 896 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 ARL4AP2-201ENST00000507378 601 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC114797.1-201ENST00000514003 728 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 SNORA31.3-201ENST00000516029 96 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 RNA5SP290-201ENST00000517133 127 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC107934.1-201ENST00000522215 217 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
GGPS1O95749 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.16□□□□□ -1.9
GGPS1O95749 AC083760.1-201ENST00000589621 670 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.16□□□□□ -1.9
GGPS1O95749 U73023.1-201ENST00000603134 700 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AL359999.1-201ENST00000604513 294 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.16□□□□□ -1.9
GGPS1O95749 AC004852.3-201ENST00000614131 326 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC092140.2-201ENST00000618027 521 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC068057.2-201ENST00000624047 895 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.16□□□□□ -1.9
GGPS1O95749 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC008669.1-201ENST00000565823 2178 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 AC092104.1-201ENST00000497346 1441 ntBASIC3.16□□□□□ -1.9
GGPS1O95749 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
GGPS1O95749 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GGPS1O95749 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
GGPS1O95749 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.15□□□□□ -1.9
GGPS1O95749 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
GGPS1O95749 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
GGPS1O95749 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AL138827.1-201ENST00000402666 306 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 NDUFS5P1-201ENST00000405668 289 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 RN7SKP123-201ENST00000410732 291 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AL451074.5-201ENST00000415894 435 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC019097.1-201ENST00000424783 735 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 MED14P1-201ENST00000430517 648 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC010153.1-201ENST00000432862 727 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 MTND1P30-201ENST00000441241 901 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.15□□□□□ -1.91
GGPS1O95749 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.15□□□□□ -1.91
GGPS1O95749 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.15□□□□□ -1.91
GGPS1O95749 MTCO2P6-201ENST00000463134 685 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC098862.1-201ENST00000504991 413 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC010486.2-201ENST00000505572 483 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.15□□□□□ -1.91
GGPS1O95749 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.15□□□□□ -1.91
GGPS1O95749 AL391261.3-201ENST00000557194 520 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.15□□□□□ -1.91
GGPS1O95749 AC138749.5-201ENST00000611461 208 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC034102.8-201ENST00000615146 484 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC116165.2-201ENST00000616705 206 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC091953.2-201ENST00000623979 160 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AC068880.5-201ENST00000624331 290 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GGPS1O95749 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GGPS1O95749 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.91
GGPS1O95749 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.14□□□□□ -1.91
GGPS1O95749 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
GGPS1O95749 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.14□□□□□ -1.91
GGPS1O95749 RNU6-1167P-201ENST00000363227 94 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 Y_RNA.245-201ENST00000364493 95 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 RNY4P16-201ENST00000364768 94 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 AL139397.2-201ENST00000404529 772 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.14□□□□□ -1.91
GGPS1O95749 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
GGPS1O95749 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.14□□□□□ -1.91
GGPS1O95749 MTND1P12-201ENST00000455231 147 ntBASIC3.14□□□□□ -1.91
GGPS1O95749 RPL21P41-201ENST00000459863 264 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms