Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 Z92545.1-201ENST00000411782 234 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST1O76090 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 MTND6P13-201ENST00000443510 523 ntBASIC3.19□□□□□ -1.9
BEST1O76090 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 RPL37P4-201ENST00000448908 268 ntBASIC3.19□□□□□ -1.9
BEST1O76090 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
BEST1O76090 RPL26P9-201ENST00000457466 433 ntBASIC3.19□□□□□ -1.9
BEST1O76090 MRPS17P3-201ENST00000465453 385 ntBASIC3.19□□□□□ -1.9
BEST1O76090 MTND1P3-201ENST00000484956 952 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
BEST1O76090 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST1O76090 AC119751.5-201ENST00000514077 770 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.19□□□□□ -1.9
BEST1O76090 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.19□□□□□ -1.9
BEST1O76090 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.19□□□□□ -1.9
BEST1O76090 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 AL590229.1-201ENST00000603497 542 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AC007619.2-201ENST00000605743 379 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AL451064.1-201ENST00000607718 471 ntBASIC3.19□□□□□ -1.9
BEST1O76090 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST1O76090 AC091304.9-201ENST00000612091 226 ntBASIC3.19□□□□□ -1.9
BEST1O76090 AL365204.3-201ENST00000612448 685 ntBASIC3.19□□□□□ -1.9
BEST1O76090 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.19□□□□□ -1.9
BEST1O76090 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
BEST1O76090 MIR3974-201ENST00000637126 96 ntBASIC3.19□□□□□ -1.9
BEST1O76090 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.19□□□□□ -1.9
BEST1O76090 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
BEST1O76090 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BEST1O76090 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BEST1O76090 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BEST1O76090 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
BEST1O76090 FGF7P2-201ENST00000332473 296 ntBASIC3.18□□□□□ -1.9
BEST1O76090 SNORD56.2-201ENST00000363242 71 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RNU6-512P-201ENST00000364438 103 ntBASIC3.18□□□□□ -1.9
BEST1O76090 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RNU2-68P-201ENST00000410878 191 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RPS3AP3-201ENST00000411933 242 ntBASIC3.18□□□□□ -1.9
BEST1O76090 HMGN1P14-201ENST00000412459 517 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RPL32P35-201ENST00000415214 394 ntBASIC3.18□□□□□ -1.9
BEST1O76090 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC090960.1-201ENST00000421072 306 ntBASIC3.18□□□□□ -1.9
BEST1O76090 HMGN2P30-201ENST00000423237 256 ntBASIC3.18□□□□□ -1.9
BEST1O76090 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.18□□□□□ -1.9
BEST1O76090 RPS24P13-201ENST00000442520 397 ntBASIC3.18□□□□□ -1.9
BEST1O76090 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
BEST1O76090 RPS27AP8-201ENST00000452665 445 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AL033528.1-201ENST00000453780 140 ntBASIC3.18□□□□□ -1.9
BEST1O76090 SNRPGP9-201ENST00000456025 225 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RPL39P36-201ENST00000490784 156 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC080014.1-201ENST00000496877 1201 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC010486.3-201ENST00000511602 785 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
BEST1O76090 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RNA5SP165-201ENST00000517142 115 ntBASIC3.18□□□□□ -1.9
BEST1O76090 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.18□□□□□ -1.9
BEST1O76090 AP002404.1-201ENST00000532005 451 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AL359212.1-201ENST00000556608 614 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
BEST1O76090 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
BEST1O76090 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
BEST1O76090 AC008498.1-201ENST00000613012 531 ntBASIC3.18□□□□□ -1.9
BEST1O76090 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.18□□□□□ -1.9
BEST1O76090 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.18□□□□□ -1.9
BEST1O76090 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.18□□□□□ -1.9
BEST1O76090 RNU5E-1-201ENST00000362477 120 ntBASIC3.17□□□□□ -1.9
BEST1O76090 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BEST1O76090 NDUFS5P4-201ENST00000412983 318 ntBASIC3.17□□□□□ -1.9
BEST1O76090 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.17□□□□□ -1.9
BEST1O76090 AC098826.1-201ENST00000433943 471 ntBASIC3.17□□□□□ -1.9
BEST1O76090 MTND4P25-201ENST00000441039 533 ntBASIC3.17□□□□□ -1.9
BEST1O76090 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.17□□□□□ -1.9
BEST1O76090 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.17□□□□□ -1.9
BEST1O76090 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BEST1O76090 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
BEST1O76090 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.17□□□□□ -1.9
BEST1O76090 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
BEST1O76090 RPS29P26-201ENST00000477483 171 ntBASIC3.17□□□□□ -1.9
BEST1O76090 RPS27P26-201ENST00000494583 239 ntBASIC3.17□□□□□ -1.9
BEST1O76090 RNU6-143P-201ENST00000516942 93 ntBASIC3.17□□□□□ -1.9
BEST1O76090 RNU2-46P-201ENST00000517038 113 ntBASIC3.17□□□□□ -1.9
BEST1O76090 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
BEST1O76090 AC060788.1-201ENST00000521318 469 ntBASIC3.17□□□□□ -1.9
BEST1O76090 SUB1P1-201ENST00000524415 382 ntBASIC3.17□□□□□ -1.9
BEST1O76090 AC022080.3-201ENST00000544433 482 ntBASIC3.17□□□□□ -1.9
BEST1O76090 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BEST1O76090 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
BEST1O76090 AL451007.1-201ENST00000595491 289 ntBASIC3.17□□□□□ -1.9
BEST1O76090 DUXAP4-201ENST00000603046 613 ntBASIC3.17□□□□□ -1.9
BEST1O76090 AP002360.4-201ENST00000606980 481 ntBASIC3.17□□□□□ -1.9
BEST1O76090 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms