Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
TRIM3O75382 GTF3AP2-201ENST00000557014 266 ntBASIC2.58□□□□□ -2
TRIM3O75382 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
TRIM3O75382 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
TRIM3O75382 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
TRIM3O75382 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
TRIM3O75382 NRBF2P5-201ENST00000603087 788 ntBASIC2.58□□□□□ -2
TRIM3O75382 AL355877.2-201ENST00000603670 358 ntBASIC2.58□□□□□ -2
TRIM3O75382 DPPA3P3-201ENST00000603842 430 ntBASIC2.58□□□□□ -2
TRIM3O75382 OR10AB1P-201ENST00000609613 938 ntBASIC2.58□□□□□ -2
TRIM3O75382 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.58□□□□□ -2
TRIM3O75382 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.58□□□□□ -2
TRIM3O75382 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.58□□□□□ -2
TRIM3O75382 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM3O75382 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM3O75382 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM3O75382 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM3O75382 Y_RNA.46-201ENST00000362695 102 ntBASIC2.57□□□□□ -2
TRIM3O75382 Y_RNA.97-201ENST00000363094 102 ntBASIC2.57□□□□□ -2
TRIM3O75382 Y_RNA.111-201ENST00000363248 100 ntBASIC2.57□□□□□ -2
TRIM3O75382 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
TRIM3O75382 RNU6-809P-201ENST00000384461 107 ntBASIC2.57□□□□□ -2
TRIM3O75382 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM3O75382 AL513331.1-201ENST00000411908 397 ntBASIC2.57□□□□□ -2
TRIM3O75382 BTF3L4P3-201ENST00000418879 476 ntBASIC2.57□□□□□ -2
TRIM3O75382 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
TRIM3O75382 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 MTCYBP39-201ENST00000437562 491 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL513043.1-201ENST00000439124 535 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL445687.1-201ENST00000439946 251 ntBASIC2.57□□□□□ -2
TRIM3O75382 BNIP3P2-201ENST00000441221 577 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
TRIM3O75382 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 GDI2P2-201ENST00000445131 608 ntBASIC2.57□□□□□ -2
TRIM3O75382 BMI1P1-201ENST00000445879 941 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.57□□□□□ -2
TRIM3O75382 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 RNU7-59P-201ENST00000459101 61 ntBASIC2.57□□□□□ -2
TRIM3O75382 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.57□□□□□ -2
TRIM3O75382 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
TRIM3O75382 RN7SKP132-201ENST00000516001 208 ntBASIC2.57□□□□□ -2
TRIM3O75382 RNU6-1282P-201ENST00000516735 96 ntBASIC2.57□□□□□ -2
TRIM3O75382 RNU6-64P-201ENST00000517119 105 ntBASIC2.57□□□□□ -2
TRIM3O75382 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.57□□□□□ -2
TRIM3O75382 TRAV28-201ENST00000557548 323 ntBASIC2.57□□□□□ -2
TRIM3O75382 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.57□□□□□ -2
TRIM3O75382 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
TRIM3O75382 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
TRIM3O75382 AC005498.1-201ENST00000592125 465 ntBASIC2.57□□□□□ -2
TRIM3O75382 AC112187.2-201ENST00000604345 283 ntBASIC2.57□□□□□ -2
TRIM3O75382 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 AL391813.2-201ENST00000609113 322 ntBASIC2.57□□□□□ -2
TRIM3O75382 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 AC131159.1-201ENST00000621854 213 ntBASIC2.57□□□□□ -2
TRIM3O75382 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
TRIM3O75382 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.57□□□□□ -2
TRIM3O75382 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM3O75382 MAPK10-266ENST00000641066 6555 ntBASIC2.57□□□□□ -2
TRIM3O75382 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.56□□□□□ -2
TRIM3O75382 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
TRIM3O75382 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
TRIM3O75382 RNU6-741P-201ENST00000383889 107 ntBASIC2.56□□□□□ -2
TRIM3O75382 RPL23AP39-201ENST00000415533 405 ntBASIC2.56□□□□□ -2
TRIM3O75382 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.56□□□□□ -2
TRIM3O75382 GTF2IP20-201ENST00000431663 360 ntBASIC2.56□□□□□ -2
TRIM3O75382 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.56□□□□□ -2
TRIM3O75382 Z82210.1-201ENST00000440037 231 ntBASIC2.56□□□□□ -2
TRIM3O75382 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.56□□□□□ -2
TRIM3O75382 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM3O75382 AC090096.1-201ENST00000489168 390 ntBASIC2.56□□□□□ -2
TRIM3O75382 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM3O75382 EIF4EP3-201ENST00000498782 656 ntBASIC2.56□□□□□ -2
TRIM3O75382 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM3O75382 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
TRIM3O75382 AC114797.1-201ENST00000514003 728 ntBASIC2.56□□□□□ -2
TRIM3O75382 RNU6-1129P-201ENST00000515964 104 ntBASIC2.56□□□□□ -2
TRIM3O75382 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
TRIM3O75382 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.56□□□□□ -2
TRIM3O75382 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.56□□□□□ -2
TRIM3O75382 LRRC34P1-201ENST00000542742 915 ntBASIC2.56□□□□□ -2
TRIM3O75382 AC007115.1-201ENST00000546853 234 ntBASIC2.56□□□□□ -2
TRIM3O75382 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
TRIM3O75382 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 AP001981.2-201ENST00000603241 418 ntBASIC2.56□□□□□ -2
TRIM3O75382 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.56□□□□□ -2
TRIM3O75382 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms