Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRD4O60885 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
BRD4O60885 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
BRD4O60885 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.28□□□□□ -2.04
BRD4O60885 RNFT1P2-201ENST00000443064 757 ntBASIC2.28□□□□□ -2.04
BRD4O60885 AL353718.1-201ENST00000451028 517 ntBASIC2.28□□□□□ -2.04
BRD4O60885 TOMM22P6-201ENST00000465035 409 ntBASIC2.28□□□□□ -2.04
BRD4O60885 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.28□□□□□ -2.04
BRD4O60885 AC079203.1-201ENST00000487972 404 ntBASIC2.28□□□□□ -2.04
BRD4O60885 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.28□□□□□ -2.04
BRD4O60885 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.28□□□□□ -2.04
BRD4O60885 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.28□□□□□ -2.04
BRD4O60885 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.28□□□□□ -2.04
BRD4O60885 ZNF92P2-201ENST00000600543 1059 ntBASIC2.28□□□□□ -2.04
BRD4O60885 AC107308.1-201ENST00000615897 301 ntBASIC2.28□□□□□ -2.04
BRD4O60885 AC106730.3-201ENST00000624568 641 ntBASIC2.28□□□□□ -2.04
BRD4O60885 AC091925.2-201ENST00000625059 256 ntBASIC2.28□□□□□ -2.04
BRD4O60885 ZNF876P-202ENST00000398732 1485 ntBASIC2.28□□□□□ -2.05
BRD4O60885 AL391987.6-201ENST00000305671 199 ntBASIC2.27□□□□□ -2.05
BRD4O60885 Y_RNA.327-201ENST00000365201 102 ntBASIC2.27□□□□□ -2.05
BRD4O60885 RNU6-796P-201ENST00000391086 107 ntBASIC2.27□□□□□ -2.05
BRD4O60885 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.27□□□□□ -2.05
BRD4O60885 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.27□□□□□ -2.05
BRD4O60885 AL590383.1-201ENST00000428602 75 ntBASIC2.27□□□□□ -2.05
BRD4O60885 AL356867.1-201ENST00000429623 299 ntBASIC2.27□□□□□ -2.05
BRD4O60885 MTATP6P7-201ENST00000453315 681 ntBASIC2.27□□□□□ -2.05
BRD4O60885 SNRPFP4-201ENST00000456366 242 ntBASIC2.27□□□□□ -2.05
BRD4O60885 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.27□□□□□ -2.05
BRD4O60885 AC109464.2-201ENST00000510242 943 ntBASIC2.27□□□□□ -2.05
BRD4O60885 AC087441.2-201ENST00000529141 262 ntBASIC2.27□□□□□ -2.05
BRD4O60885 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.27□□□□□ -2.05
BRD4O60885 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.27□□□□□ -2.05
BRD4O60885 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.27□□□□□ -2.05
BRD4O60885 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.27□□□□□ -2.05
BRD4O60885 AL163051.2-201ENST00000618976 735 ntBASIC2.27□□□□□ -2.05
BRD4O60885 AL445493.3-201ENST00000619568 477 ntBASIC2.27□□□□□ -2.05
BRD4O60885 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.27□□□□□ -2.05
BRD4O60885 AC132825.7-201ENST00000638744 335 ntBASIC2.27□□□□□ -2.05
BRD4O60885 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
BRD4O60885 Y_RNA.112-201ENST00000363250 102 ntBASIC2.26□□□□□ -2.05
BRD4O60885 RNU6-1155P-201ENST00000363554 107 ntBASIC2.26□□□□□ -2.05
BRD4O60885 RNU6-270P-201ENST00000364131 105 ntBASIC2.26□□□□□ -2.05
BRD4O60885 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.26□□□□□ -2.05
BRD4O60885 AL035405.1-201ENST00000400795 710 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AL030996.1-201ENST00000411430 235 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.26□□□□□ -2.05
BRD4O60885 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.26□□□□□ -2.05
BRD4O60885 AL357078.2-201ENST00000416486 427 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.26□□□□□ -2.05
BRD4O60885 VN1R42P-201ENST00000424651 344 ntBASIC2.26□□□□□ -2.05
BRD4O60885 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.26□□□□□ -2.05
BRD4O60885 AC092170.1-201ENST00000440211 356 ntBASIC2.26□□□□□ -2.05
BRD4O60885 SSXP1-201ENST00000453640 473 ntBASIC2.26□□□□□ -2.05
BRD4O60885 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.26□□□□□ -2.05
BRD4O60885 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.26□□□□□ -2.05
BRD4O60885 AC093767.1-201ENST00000504523 156 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.26□□□□□ -2.05
BRD4O60885 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
BRD4O60885 ZNF705CP-201ENST00000530515 889 ntBASIC2.26□□□□□ -2.05
BRD4O60885 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.26□□□□□ -2.05
BRD4O60885 AC079148.1-201ENST00000565944 819 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC095057.3-201ENST00000567102 1157 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC022662.1-201ENST00000580252 331 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.26□□□□□ -2.05
BRD4O60885 RN7SL622P-201ENST00000585292 275 ntBASIC2.26□□□□□ -2.05
BRD4O60885 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.26□□□□□ -2.05
BRD4O60885 AC013444.2-201ENST00000603317 787 ntBASIC2.26□□□□□ -2.05
BRD4O60885 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
BRD4O60885 AC103710.2-202ENST00000641454 2853 ntBASIC2.26□□□□□ -2.05
BRD4O60885 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.26□□□□□ -2.05
BRD4O60885 MIR16-2-201ENST00000362117 81 ntBASIC2.25□□□□□ -2.05
BRD4O60885 RNU6-882P-201ENST00000391025 103 ntBASIC2.25□□□□□ -2.05
BRD4O60885 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.25□□□□□ -2.05
BRD4O60885 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.25□□□□□ -2.05
BRD4O60885 OSTCP8-201ENST00000445117 448 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.25□□□□□ -2.05
BRD4O60885 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.25□□□□□ -2.05
BRD4O60885 Z73417.1-201ENST00000447373 778 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC092155.2-201ENST00000454675 477 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC026801.1-201ENST00000497178 464 ntBASIC2.25□□□□□ -2.05
BRD4O60885 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.25□□□□□ -2.05
BRD4O60885 AC022447.1-201ENST00000515358 464 ntBASIC2.25□□□□□ -2.05
BRD4O60885 RNU6-928P-201ENST00000516876 104 ntBASIC2.25□□□□□ -2.05
BRD4O60885 RNU6-798P-201ENST00000516912 103 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.25□□□□□ -2.05
BRD4O60885 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.25□□□□□ -2.05
BRD4O60885 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
BRD4O60885 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.25□□□□□ -2.05
BRD4O60885 HSPE1P3-201ENST00000559254 309 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC104229.1-201ENST00000561364 255 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC096586.1-201ENST00000610267 561 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC098657.3-201ENST00000620434 263 ntBASIC2.25□□□□□ -2.05
BRD4O60885 AC073592.7-201ENST00000623659 507 ntBASIC2.25□□□□□ -2.05
BRD4O60885 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
BRD4O60885 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
BRD4O60885 MFSD8-213ENST00000641134 1327 ntBASIC2.25□□□□□ -2.05
BRD4O60885 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.25□□□□□ -2.05
BRD4O60885 MCTS2P-201ENST00000394552 546 ntBASIC2.24□□□□□ -2.05
BRD4O60885 RPS3AP24-201ENST00000407896 734 ntBASIC2.24□□□□□ -2.05
BRD4O60885 AL133384.1-201ENST00000412744 351 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms