Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 RPS20P20-201ENST00000460498 340 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM38O00635 RNU6-1281P-201ENST00000516223 105 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 RNU7-51P-201ENST00000516560 62 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC022616.3-201ENST00000523940 148 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM38O00635 AL355375.2-201ENST00000574825 175 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM38O00635 AC244505.7-201ENST00000599675 272 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.6-201ENST00000603753 252 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.11-201ENST00000604059 253 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC008162.1-201ENST00000604718 254 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.1-201ENST00000604752 252 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.5-201ENST00000605253 252 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.12-201ENST00000605291 253 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL136363.1-201ENST00000605349 337 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.8-201ENST00000605353 252 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL670379.7-201ENST00000605823 252 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AL161734.1-201ENST00000609720 557 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC005858.4-201ENST00000623191 700 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC110801.1-201ENST00000623590 212 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 AC091905.1-201ENST00000624400 311 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM38O00635 EXOC5P1-201ENST00000510543 1969 ntBASIC3.85□□□□□ -1.79
TRIM38O00635 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM38O00635 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM38O00635 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TRIM38O00635 Y_RNA.144-201ENST00000363521 113 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 RNA5SP97-201ENST00000365006 84 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM38O00635 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM38O00635 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRIM38O00635 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM38O00635 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM38O00635 SAR1AP4-201ENST00000429225 591 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM38O00635 RPL31P35-201ENST00000431058 377 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC002486.1-201ENST00000435098 391 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM38O00635 GAPDHP27-201ENST00000447427 1020 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 PRSS3P4-201ENST00000453323 162 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 RNU6-420P-201ENST00000458780 107 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM38O00635 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM38O00635 AC114797.1-201ENST00000514003 728 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM38O00635 RNU6-277P-201ENST00000516272 106 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC105029.1-201ENST00000520250 669 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.84□□□□□ -1.79
TRIM38O00635 AP001804.3-201ENST00000525146 880 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM38O00635 AC011712.1-201ENST00000588959 234 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 VN1R80P-201ENST00000597126 338 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 AC005344.1-201ENST00000613391 459 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TRIM38O00635 AC139792.3-201ENST00000623525 224 ntBASIC3.84□□□□□ -1.79
TRIM38O00635 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM38O00635 AP004289.2-201ENST00000444413 1457 ntBASIC3.84□□□□□ -1.8
TRIM38O00635 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
TRIM38O00635 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
TRIM38O00635 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM38O00635 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.8
TRIM38O00635 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.8
TRIM38O00635 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.83□□□□□ -1.8
TRIM38O00635 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM38O00635 RNU6-254P-201ENST00000363377 107 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 Y_RNA.216-201ENST00000364205 93 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 RNU1-39P-201ENST00000383897 165 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AL513331.1-201ENST00000411908 397 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 SYF2P2-201ENST00000417620 583 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AC068533.1-201ENST00000418542 415 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AL451054.2-201ENST00000420896 202 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AL353193.1-201ENST00000421444 268 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 GTF2IP20-201ENST00000431663 360 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 FCF1P1-201ENST00000432690 571 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM38O00635 MTND3P2-201ENST00000438452 342 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 SNORA71B-202ENST00000439232 272 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 CALM1P1-201ENST00000442082 433 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM38O00635 C1DP4-201ENST00000455429 424 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 HMGN2P7-201ENST00000456186 273 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 SNRPGP3-201ENST00000469405 227 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.83□□□□□ -1.8
TRIM38O00635 RN7SL432P-201ENST00000484057 298 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AL049874.1-201ENST00000489560 388 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM38O00635 RN7SKP13-201ENST00000515933 244 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 SNORA70.14-201ENST00000516205 110 ntBASIC3.83□□□□□ -1.8
TRIM38O00635 SCARNA14-201ENST00000516903 136 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms