Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 Y_RNA.2-201ENST00000362330 96 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 SNORA20.1-201ENST00000364790 130 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
RFXAPO00287 SNORA5A-201ENST00000384111 134 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 Y_RNA.515-201ENST00000384535 112 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 SNORD70.1-201ENST00000391007 85 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC110754.1-201ENST00000399740 601 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AL583834.1-201ENST00000406943 343 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 RNU6-55P-201ENST00000411092 107 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC096664.2-201ENST00000411843 406 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 PSMA2P3-201ENST00000429685 675 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 HMGN2P31-201ENST00000432430 273 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AL353597.2-202ENST00000434901 373 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.44□□□□□ -1.7
RFXAPO00287 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.44□□□□□ -1.7
RFXAPO00287 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFXAPO00287 AC016696.1-201ENST00000446949 318 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFXAPO00287 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RFXAPO00287 SNORD5.1-201ENST00000458800 75 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC022795.1-201ENST00000473808 480 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC087879.1-201ENST00000474343 374 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 HMGB1P35-201ENST00000503360 598 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 RNU6-352P-201ENST00000516908 107 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC022616.4-201ENST00000522985 181 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.44□□□□□ -1.7
RFXAPO00287 AL121576.1-201ENST00000556055 276 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.44□□□□□ -1.7
RFXAPO00287 AC091178.1-203ENST00000584586 279 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AC008521.1-201ENST00000587471 187 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 AL590099.1-201ENST00000615276 138 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RFXAPO00287 ZNF33CP-201ENST00000432492 2030 ntBASIC4.44□□□□□ -1.7
RFXAPO00287 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RFXAPO00287 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
RFXAPO00287 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RNU6-200P-201ENST00000364743 107 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RNA5SP151-201ENST00000365632 117 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 Y_RNA.462-201ENST00000384268 102 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 PTMAP5-201ENST00000393073 333 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 NDUFB4P4-201ENST00000404822 243 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 SNORA57.3-201ENST00000411095 141 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 Z92545.1-201ENST00000411782 234 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 HSPE1P12-201ENST00000412576 301 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 Z99755.1-201ENST00000414048 380 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RPLP0P7-201ENST00000416050 667 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 AL590135.1-201ENST00000422215 156 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RPL23AP50-201ENST00000434149 455 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RPL21P112-201ENST00000434403 463 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 PRELID3BP1-201ENST00000457142 540 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RNA5SP246-201ENST00000458909 119 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RPL9P32-201ENST00000464118 620 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 RPS23P3-201ENST00000470993 430 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 RPS29P19-201ENST00000479709 171 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AC074250.1-201ENST00000511117 192 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.43□□□□□ -1.7
RFXAPO00287 SNORA14.1-201ENST00000516113 141 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 AC091516.1-201ENST00000549191 703 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AC068446.3-201ENST00000555285 382 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.43□□□□□ -1.7
RFXAPO00287 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.43□□□□□ -1.7
RFXAPO00287 MIR3910-1-201ENST00000580936 111 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AC006254.3-201ENST00000603353 884 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AL031176.1-201ENST00000604554 466 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AL161423.1-201ENST00000613700 262 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 MIR7151-201ENST00000617477 60 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AC055839.1-201ENST00000634467 498 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 AL512643.1-201ENST00000635735 524 ntBASIC4.43□□□□□ -1.7
RFXAPO00287 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFXAPO00287 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
RFXAPO00287 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
RFXAPO00287 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFXAPO00287 Y_RNA.39-201ENST00000362620 98 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 SNORD82-201ENST00000365530 70 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 Y_RNA.555-201ENST00000384673 110 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 MIR1302-6-201ENST00000408466 90 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 RNA5SP107-201ENST00000411358 122 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFXAPO00287 AL133244.1-201ENST00000456007 258 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 RNU7-59P-201ENST00000459101 61 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 RNU6-323P-201ENST00000521915 107 ntBASIC4.42□□□□□ -1.7
RFXAPO00287 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.42□□□□□ -1.7
RFXAPO00287 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.42□□□□□ -1.7
RFXAPO00287 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.42□□□□□ -1.7
RFXAPO00287 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFXAPO00287 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms