Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 DEFB108A-201ENST00000530110 222 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AC027176.1-201ENST00000560204 514 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 WISP1-OT1-201ENST00000602893 642 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 AC090132.2-201ENST00000615881 347 ntBASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM4Q9ULL8 Y_RNA.46-201ENST00000362695 102 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 MIR512-1-201ENST00000384913 84 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 RPS20P2-201ENST00000402520 389 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 GDI2P2-201ENST00000445131 608 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-420P-201ENST00000458780 107 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 SNORA31.21-201ENST00000517180 77 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC025881.1-201ENST00000518851 512 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC135628.1-201ENST00000568867 534 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 ROCK1P1-201ENST00000573767 549 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC121334.2-201ENST00000605387 271 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC007494.3-201ENST00000624660 743 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 AC097655.1-201ENST00000635075 318 ntBASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM4Q9ULL8 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 HSPA8P4-201ENST00000511877 1920 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 RNU2-62P-201ENST00000410868 191 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 USP9YP26-201ENST00000421008 661 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC112220.1-201ENST00000434628 355 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 TAAR7P-201ENST00000436141 242 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 BET1P1-201ENST00000482276 359 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 SRIP1-201ENST00000489235 288 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 RNU6-1256P-201ENST00000516539 103 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC123904.3-201ENST00000547218 814 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 MIR3915-201ENST00000578518 97 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC012360.2-201ENST00000609349 391 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 AC245517.5-201ENST00000611529 162 ntBASIC5.15□□□□□ -1.58
SHROOM4Q9ULL8 MIR148B-201ENST00000362252 99 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 SPA17P1-201ENST00000416656 452 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AC006366.1-201ENST00000422002 759 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AC118469.1-201ENST00000442943 488 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 MTCO1P47-201ENST00000523889 1271 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 MIR4648-201ENST00000580107 72 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AC019226.2-201ENST00000625973 424 ntBASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM4Q9ULL8 RNY3P9-201ENST00000384727 106 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 OR2AS1P-201ENST00000427827 319 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 HIGD1AP11-201ENST00000438361 280 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 UBE2D3P4-201ENST00000441973 436 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC125238.1-201ENST00000448842 249 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 KATNBL1P6-201ENST00000453433 915 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 SNORD59.2-201ENST00000516873 68 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 RNA5SP291-201ENST00000517222 105 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC245166.1-201ENST00000521012 253 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC100870.1-201ENST00000522035 505 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC093012.1-202ENST00000549403 582 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC008277.2-201ENST00000605196 797 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 PABPC1P9-201ENST00000426076 1612 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 RNU6-809P-201ENST00000384461 107 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL513331.1-201ENST00000411908 397 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL353777.1-201ENST00000425552 326 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 TIMM9P1-201ENST00000436122 256 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL445567.1-201ENST00000439121 144 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL049734.2-201ENST00000441066 616 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 RN7SL330P-201ENST00000469709 307 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 NRON-201ENST00000517270 370 ntBASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.13□□□□□ -1.59
SHROOM4Q9ULL8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms