Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC105245.1-201ENST00000581934 244 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 RN7SL622P-201ENST00000585292 275 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AC078899.2-201ENST00000595282 212 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AP002791.1-201ENST00000623291 381 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 HSPA8P4-201ENST00000511877 1920 ntBASIC1.71□□□□□ -2.14
VPS29Q9UBQ0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 MIR1294-201ENST00000408503 142 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 RNU4-26P-201ENST00000410270 107 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 ZNF90P2-204ENST00000419323 1075 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AL121882.1-201ENST00000422893 417 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 USP9YP15-201ENST00000442391 422 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AL096803.2-201ENST00000450032 677 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC092436.1-201ENST00000506450 503 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 RANP3-201ENST00000530970 276 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 CBX3P7-201ENST00000532876 502 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC022662.1-201ENST00000580252 331 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC103710.2-201ENST00000609912 942 ntBASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS29Q9UBQ0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 RNU6-492P-201ENST00000363035 104 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 RPL23AP29-201ENST00000397284 453 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 RNU6-575P-201ENST00000411326 105 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 RPL21P99-201ENST00000480369 423 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 BOLA3P3-201ENST00000505182 232 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 LTV1P1-201ENST00000510683 1237 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 YWHAZP1-201ENST00000556286 722 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 MIR4529-201ENST00000578110 78 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC136601.2-201ENST00000604356 474 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AC007349.4-201ENST00000608114 532 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AP003400.5-201ENST00000624827 617 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AL159972.1-201ENST00000625150 448 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 MTCO1P9-201ENST00000505577 1534 ntBASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS29Q9UBQ0 SNORD114-1-201ENST00000362705 72 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 RNU6-353P-201ENST00000364266 108 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 RNU6-1140P-201ENST00000410517 106 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AL592310.1-201ENST00000414330 671 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 BPY2DP-201ENST00000422208 265 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 TRIM60P13-201ENST00000432350 1283 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 RPL21P134-201ENST00000453468 483 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 RPS20P22-201ENST00000473700 357 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC107032.1-201ENST00000485945 480 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 HMGB3P17-201ENST00000504195 649 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC010460.2-201ENST00000509054 677 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 MRPS17P9-201ENST00000511924 393 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC007151.1-201ENST00000572774 483 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC024619.4-201ENST00000580924 316 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 MIR4513-201ENST00000581077 86 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AL391813.1-201ENST00000603098 260 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC104763.3-201ENST00000613765 618 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 U4atac.1-201ENST00000618345 95 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 AC012150.2-201ENST00000621300 544 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 MIR4275-201ENST00000636486 87 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 MTND1P37-201ENST00000636562 264 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 MTND5P30-201ENST00000452896 1731 ntBASIC1.68□□□□□ -2.14
VPS29Q9UBQ0 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VPS29Q9UBQ0 MIR217-201ENST00000384817 110 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms