Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 RNU6-143P-201ENST00000516942 93 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AP000889.1-201ENST00000530968 660 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 MIR3609-201ENST00000582661 80 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC012507.3-201ENST00000603556 477 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AL391646.1-201ENST00000603860 190 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC025449.1-201ENST00000603896 529 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AL161798.1-201ENST00000604630 131 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC107294.1-201ENST00000609524 467 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC025034.2-201ENST00000623264 286 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC093648.1-201ENST00000623546 606 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 AC124864.2-201ENST00000624736 186 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 U6.114-201ENST00000636407 96 ntBASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HCN3Q9P1Z3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 FRG1CP-201ENST00000358464 769 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.159-201ENST00000363674 87 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 Y_RNA.409-201ENST00000383990 98 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RNU6-140P-201ENST00000384566 108 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC068533.1-201ENST00000418542 415 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 ZNF863P-201ENST00000426746 417 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 YME1L1P1-201ENST00000429435 297 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 CYCSP4-201ENST00000429682 331 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 GPM6BP2-201ENST00000432046 144 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RPL36AP6-201ENST00000435770 321 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 HMGN2P20-201ENST00000437531 273 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RPS15AP9-201ENST00000439856 381 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 DNAJC19P4-201ENST00000440115 345 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 GPM6BP1-201ENST00000446387 144 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC025518.1-201ENST00000479856 347 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RPL39P36-201ENST00000490784 156 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 APOOP4-201ENST00000513530 597 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RNU6-506P-201ENST00000516553 94 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 RNU6-314P-201ENST00000516574 104 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC103843.2-201ENST00000530523 682 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC016957.1-201ENST00000534895 309 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 BNIP3P9-201ENST00000603714 553 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC022893.3-201ENST00000607665 437 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HCN3Q9P1Z3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 RNU6-283P-201ENST00000364788 107 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 MIR7-3-201ENST00000384898 110 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 RNU6-328P-201ENST00000390887 106 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 AC093578.1-201ENST00000415219 368 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 AC092047.1-201ENST00000424997 240 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 ISCA1P1-201ENST00000426679 387 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 MTCO2P19-201ENST00000427513 598 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 AL592045.1-201ENST00000429867 352 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 SETP5-201ENST00000437270 562 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 CECR9-201ENST00000453421 199 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 MRPS17P3-201ENST00000465453 385 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 RPL9P33-201ENST00000484311 566 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 ADI1P3-201ENST00000549509 470 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 HMGB1P6-201ENST00000569046 646 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 EIF1P4-201ENST00000572664 335 ntBASIC3.34□□□□□ -1.87
HCN3Q9P1Z3 AC024619.4-201ENST00000580924 316 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms