Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 SNORD56.2-201ENST00000363242 71 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-1155P-201ENST00000363554 107 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-629P-201ENST00000384061 103 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RNY3P14-201ENST00000384309 102 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MIR670-201ENST00000390142 98 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RNU2-62P-201ENST00000410868 191 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC022028.1-201ENST00000412054 408 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 USP9YP6-201ENST00000413550 854 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AL137014.1-201ENST00000420490 1226 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC012498.1-201ENST00000424037 437 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RPL21P66-201ENST00000426566 466 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC137499.1-201ENST00000427602 88 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC000111.3-201ENST00000433478 193 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 GPR143P-201ENST00000434155 205 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 VN1R34P-201ENST00000447387 883 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RPL23AP20-201ENST00000447965 421 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RPL21P10-201ENST00000463521 490 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RPS15AP36-201ENST00000492022 382 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC093663.1-201ENST00000497190 394 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 RNU6-64P-201ENST00000517119 105 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MTND1P35-201ENST00000526739 508 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC125611.2-201ENST00000551907 647 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC025678.1-201ENST00000567861 338 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4474-201ENST00000579189 78 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4429-201ENST00000580105 73 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC006504.3-201ENST00000586818 523 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC008277.2-201ENST00000605196 797 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AL355073.2-201ENST00000612106 557 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AL355365.1-201ENST00000616480 294 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC009161.2-201ENST00000624626 138 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC019226.1-201ENST00000625666 515 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AC116096.1-201ENST00000566804 2314 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 RNU1-39P-201ENST00000383897 165 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 SNORA48.7-201ENST00000391302 135 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 USP9YP27-201ENST00000418455 438 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 RPL7P54-201ENST00000438336 674 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 RPL7P23-201ENST00000493874 747 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC103783.1-201ENST00000520506 373 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 ARL2BPP2-201ENST00000550907 489 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AL121603.1-201ENST00000553815 142 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC098848.2-201ENST00000588023 330 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC007363.1-201ENST00000604736 620 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AC104458.1-201ENST00000608243 463 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 MIR1321-201ENST00000637766 79 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 AP001350.1-201ENST00000601906 1524 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 CR848007.1-201ENST00000442354 1699 ntBASIC3.32□□□□□ -1.88
SMARCAL1Q9NZC9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms