Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AP001330.4-201ENST00000604350 154 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AL021997.1-201ENST00000605757 193 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC004908.2-201ENST00000609090 574 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC090115.4-201ENST00000609970 188 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC103710.1-201ENST00000610003 901 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC002076.2-201ENST00000617362 122 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC138649.3-201ENST00000622154 254 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 AC095031.1-201ENST00000623685 672 ntBASIC2.88□□□□□ -1.95
NDE1Q9NXR1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NDE1Q9NXR1 MTND5P26-201ENST00000426018 1752 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RN7SKP226-201ENST00000364912 300 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RNU1-39P-201ENST00000383897 165 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 Y_RNA.582-201ENST00000391023 95 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RPL23AP32-201ENST00000395315 459 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 Y_RNA.619-201ENST00000410951 90 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 MTCO1P39-201ENST00000426148 480 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 C8orf59P1-201ENST00000429930 303 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC024082.2-201ENST00000434771 238 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC090774.1-201ENST00000435925 246 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RABEPKP1-201ENST00000440529 1026 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RNU7-59P-201ENST00000459101 61 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 MLLT10P2-201ENST00000506434 249 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 RNU6-64P-201ENST00000517119 105 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 DEFB108A-201ENST00000530110 222 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 SNRPGP16-201ENST00000533275 226 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 MIR3682-201ENST00000581338 84 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 KC877982.1-201ENST00000602313 470 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 MIR98-201ENST00000606724 119 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC004067.1-201ENST00000608733 700 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AL161734.1-201ENST00000609720 557 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC109347.2-201ENST00000610220 349 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC087241.4-201ENST00000612441 480 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AL603758.1-201ENST00000618654 241 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
NDE1Q9NXR1 AC233263.6-201ENST00000631132 1963 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
NDE1Q9NXR1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 MIR208A-201ENST00000362287 71 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 RNU6-282P-201ENST00000365357 103 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 CD24P4-201ENST00000382840 243 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 SNORA5A-201ENST00000384111 134 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 MIR449B-201ENST00000384995 97 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 Y_RNA.599-201ENST00000410489 109 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 ELOCP17-201ENST00000414751 326 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 RPL7P10-201ENST00000417407 739 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 ELOCP4-201ENST00000420090 333 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL451074.3-201ENST00000437709 472 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL133547.1-201ENST00000448546 220 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 MTND1P9-201ENST00000453775 944 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 MTCYBP1-201ENST00000454315 1119 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 RPL21P10-201ENST00000463521 490 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 RPS3AP17-201ENST00000472594 777 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC105252.1-201ENST00000503089 286 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 SNORA9.3-201ENST00000516383 129 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC016957.1-201ENST00000534895 309 ntBASIC2.86□□□□□ -1.95
NDE1Q9NXR1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.86□□□□□ -1.95
NDE1Q9NXR1 AL136363.1-201ENST00000605349 337 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms