Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AP006245.1-201ENST00000522549 120 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 FAM92A1P1-201ENST00000528023 890 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC022880.1-201ENST00000534017 973 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 BNIP3P9-201ENST00000603714 553 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 AC025449.1-201ENST00000603896 529 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 BX323046.1-201ENST00000610145 535 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 ZYXP1-201ENST00000617638 118 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 AP003355.3-201ENST00000623465 114 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 Z99571.1-201ENST00000636677 394 ntBASIC3□□□□□ -1.93
CHMP1AQ9HD42 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3□□□□□ -1.93
CHMP1AQ9HD42 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHMP1AQ9HD42 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RNA5SP383-201ENST00000362934 120 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 SNORA4.3-201ENST00000365564 137 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RNU1-101P-201ENST00000391171 127 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RN7SKP156-201ENST00000410308 342 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 MTCO2P19-201ENST00000427513 598 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL357552.1-201ENST00000445254 415 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 HMGN1P18-201ENST00000457642 277 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RPL37P6-201ENST00000460682 294 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RPL23AP67-201ENST00000465341 474 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC233702.1-201ENST00000482905 502 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC139453.3-201ENST00000493276 369 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC093663.1-201ENST00000497190 394 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 HMGB1P29-201ENST00000505659 499 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RBBP4P6-201ENST00000508098 202 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RNU6-123P-201ENST00000516163 102 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 RNU6-579P-201ENST00000516879 102 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC103843.2-201ENST00000530523 682 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL391261.3-201ENST00000557194 520 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 MIR5187-201ENST00000583479 76 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC008521.1-201ENST00000587471 187 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC067959.1-201ENST00000604334 379 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 MIR15A-201ENST00000607334 83 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC012409.4-201ENST00000612923 249 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC025034.2-201ENST00000623264 286 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 U2.21-201ENST00000637295 81 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC233263.6-201ENST00000631132 1963 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 AL359693.1-201ENST00000614959 2407 ntBASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP1AQ9HD42 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC103710.2-202ENST00000641454 2853 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC103988.1-201ENST00000566382 2177 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RNU6-179P-201ENST00000363350 107 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RNU6-884P-201ENST00000363889 107 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL354719.1-201ENST00000406535 843 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RPL5P18-201ENST00000406671 891 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RN7SKP123-201ENST00000410732 291 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC126124.2-201ENST00000413542 321 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RPL21P40-201ENST00000428586 483 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC073464.1-201ENST00000429823 534 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RPL36AP53-201ENST00000432891 316 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 OR4C10P-201ENST00000434991 931 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RPL23AP22-201ENST00000437556 453 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 CYCSP32-201ENST00000440548 321 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 ELOCP23-201ENST00000452014 332 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL133162.1-201ENST00000463228 453 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 RPS3AP14-201ENST00000483907 780 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms