Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-64P-201ENST00000517119 105 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP44Q9H0E7 AP002453.2-201ENST00000533503 320 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC107016.2-201ENST00000547968 190 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 DUXAP4-201ENST00000603046 613 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC010678.1-201ENST00000614118 713 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 AC091953.2-201ENST00000623979 160 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 PISRT1-201ENST00000626175 531 ntBASIC3.57□□□□□ -1.84
USP44Q9H0E7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP44Q9H0E7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP44Q9H0E7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP44Q9H0E7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 Y_RNA.194-201ENST00000363985 102 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RNY3P13-201ENST00000365542 102 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 SNORA75-201ENST00000384158 137 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 MIR493-201ENST00000385254 89 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL359634.1-202ENST00000404721 284 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RN7SKP58-201ENST00000411010 305 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC119618.1-201ENST00000434191 222 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 TAAR7P-201ENST00000436141 242 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC025750.2-201ENST00000442609 450 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL136380.1-201ENST00000447970 162 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 MTND1P27-201ENST00000451117 902 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RPS20P22-201ENST00000473700 357 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC091435.1-201ENST00000505442 584 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 ARL2BPP4-201ENST00000506854 471 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC079140.3-201ENST00000511111 550 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RNA5SP367-201ENST00000516557 118 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 RNA5SP291-201ENST00000517222 105 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 NRON-201ENST00000517270 370 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC128657.1-201ENST00000549459 145 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 RPS3AP4-201ENST00000555161 764 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 HMGB1P14-201ENST00000557424 591 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.6-201ENST00000603753 252 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.11-201ENST00000604059 253 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC008162.1-201ENST00000604718 254 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.1-201ENST00000604752 252 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.5-201ENST00000605253 252 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.12-201ENST00000605291 253 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.8-201ENST00000605353 252 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL670379.7-201ENST00000605823 252 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC090115.4-201ENST00000609970 188 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 AL138880.2-201ENST00000616214 239 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP44Q9H0E7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.56□□□□□ -1.84
USP44Q9H0E7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP44Q9H0E7 AC092593.1-201ENST00000515413 1815 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.56□□□□□ -1.84
USP44Q9H0E7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP44Q9H0E7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 RPL23AP32-201ENST00000395315 459 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AL645937.1-202ENST00000421799 937 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 DLGAP5P1-201ENST00000430307 464 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AL031667.1-201ENST00000440222 725 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AL022238.1-201ENST00000442557 355 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC013267.1-201ENST00000458227 267 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC010631.1-201ENST00000474150 156 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 RPL31P60-201ENST00000478450 367 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 MTCO3P7-201ENST00000510008 774 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 MTND3P5-201ENST00000512798 333 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC091826.1-201ENST00000514065 313 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC107934.1-201ENST00000522215 217 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AP002963.1-201ENST00000530590 184 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 MIR4293-201ENST00000584305 78 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 MIR3611-201ENST00000584484 83 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AL451064.1-201ENST00000607718 471 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC103591.3-201ENST00000608684 209 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC008250.2-201ENST00000615261 205 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 AC092656.1-203ENST00000624134 423 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.55□□□□□ -1.84
USP44Q9H0E7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
USP44Q9H0E7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP44Q9H0E7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms