Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 FRG1KP-201ENST00000623592 341 ntBASIC2.74□□□□□ -1.97
SSX3Q99909 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX3Q99909 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX3Q99909 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SSX3Q99909 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC032011.1-201ENST00000611703 1549 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 RNU6-701P-201ENST00000384059 107 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 SNORD116-8-201ENST00000384365 95 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 RNY3P9-201ENST00000384727 106 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL357075.1-201ENST00000404107 726 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 RNA5SP120-201ENST00000410900 112 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL096701.2-201ENST00000416920 238 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 NPM1P11-201ENST00000417106 855 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 RAC1P6-201ENST00000423911 575 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC010153.1-201ENST00000432862 727 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC119618.1-201ENST00000434191 222 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 RPL23AP83-201ENST00000434984 473 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX3Q99909 MTND1P12-201ENST00000455231 147 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX3Q99909 SNRPFP4-201ENST00000456366 242 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 BX510359.1-201ENST00000456973 237 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SSX3Q99909 RPL36AP51-201ENST00000487216 318 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC105252.1-201ENST00000503089 286 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC011979.2-201ENST00000527568 352 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AP003181.2-201ENST00000528941 181 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 MIR5195-201ENST00000583555 115 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.73□□□□□ -1.97
SSX3Q99909 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 Z99497.2-201ENST00000603634 310 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.6-201ENST00000603753 252 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.11-201ENST00000604059 253 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC025811.1-201ENST00000604312 472 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL162713.1-201ENST00000604480 262 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL161756.2-201ENST00000604597 246 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC008162.1-201ENST00000604718 254 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.1-201ENST00000604752 252 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.5-201ENST00000605253 252 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.12-201ENST00000605291 253 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.8-201ENST00000605353 252 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL670379.7-201ENST00000605823 252 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 FTX_3.1-201ENST00000610451 147 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AC034102.8-201ENST00000615146 484 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 Z99129.2-201ENST00000619967 314 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 AC025048.6-202ENST00000627667 438 ntBASIC2.73□□□□□ -1.97
SSX3Q99909 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.73□□□□□ -1.97
SSX3Q99909 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.73□□□□□ -1.97
SSX3Q99909 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SSX3Q99909 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.72□□□□□ -1.97
SSX3Q99909 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSX3Q99909 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SSX3Q99909 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
SSX3Q99909 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSX3Q99909 AC093831.2-201ENST00000624393 3427 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SSX3Q99909 RNU4-21P-201ENST00000362802 126 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RNU6-1167P-201ENST00000363227 94 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AL021407.1-201ENST00000404531 386 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RNU2-36P-201ENST00000410361 191 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AC092427.1-202ENST00000430569 476 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RPS15AP7-201ENST00000439294 405 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.72□□□□□ -1.97
SSX3Q99909 RPL26P9-201ENST00000457466 433 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RN7SL807P-201ENST00000470923 297 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RN7SL432P-201ENST00000484057 298 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AC026427.2-201ENST00000506228 536 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.72□□□□□ -1.97
SSX3Q99909 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.72□□□□□ -1.97
SSX3Q99909 RNU2-10P-201ENST00000516375 211 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AP003467.2-201ENST00000520175 319 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.72□□□□□ -1.97
SSX3Q99909 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.72□□□□□ -1.97
SSX3Q99909 AC022634.1-201ENST00000520765 532 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SSX3Q99909 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.72□□□□□ -1.97
SSX3Q99909 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
SSX3Q99909 ARL2BPP2-201ENST00000550907 489 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 RPL21P5-201ENST00000554662 472 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.72□□□□□ -1.97
SSX3Q99909 HMGN1P30-201ENST00000589286 268 ntBASIC2.72□□□□□ -1.97
SSX3Q99909 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.72□□□□□ -1.97
SSX3Q99909 BNIP3P8-201ENST00000597863 560 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms