Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPS20P20-201ENST00000460498 340 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC140059.1-201ENST00000489238 361 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP3S1Q92572 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AP001317.1-201ENST00000531194 960 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 GNAI2P1-201ENST00000541815 315 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 NACAP3-201ENST00000552100 481 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 MTCYBP23-201ENST00000558717 1102 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC233266.2-201ENST00000567067 528 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC104581.2-201ENST00000572227 430 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC013476.2-201ENST00000614456 459 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.52□□□□□ -2.17
AP3S1Q92572 AC009233.1-201ENST00000616477 371 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
AP3S1Q92572 AC026634.1-201ENST00000634369 198 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
AP3S1Q92572 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
AP3S1Q92572 RNU6-796P-201ENST00000391086 107 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AC019129.1-201ENST00000403786 261 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AL023284.1-201ENST00000403956 276 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AL136133.1-201ENST00000413694 376 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AL451062.2-201ENST00000427515 271 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 Z98742.2-201ENST00000431564 187 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3S1Q92572 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AC008834.1-201ENST00000511612 175 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AC233702.2-202ENST00000562547 291 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 BNIP3P24-201ENST00000593398 557 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 BNIP3P25-201ENST00000596023 559 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.51□□□□□ -2.17
AP3S1Q92572 AC004853.1-201ENST00000604902 698 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AL138478.1-201ENST00000612252 832 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AC022202.1-201ENST00000613515 211 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 MIR1264-201ENST00000616374 69 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AC006213.5-201ENST00000619673 288 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AC106730.3-201ENST00000624568 641 ntBASIC1.51□□□□□ -2.17
AP3S1Q92572 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3S1Q92572 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
AP3S1Q92572 RNA5SP240-201ENST00000365355 128 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 SNORA48.2-201ENST00000390926 124 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 RNU2-28P-201ENST00000410457 189 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 RNU6-516P-201ENST00000411381 104 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 USP9YP19-201ENST00000412165 485 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 USP9YP13-201ENST00000417797 480 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 MTND2P5-201ENST00000432656 1006 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3S1Q92572 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC126389.1-201ENST00000477436 290 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC004924.1-201ENST00000480160 781 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC096745.1-201ENST00000509945 370 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC017037.2-201ENST00000513850 890 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AP003122.3-201ENST00000526316 255 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC090502.2-201ENST00000549267 280 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3S1Q92572 RMST_10.1-201ENST00000616309 154 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AC004009.2-201ENST00000623016 728 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.5□□□□□ -2.17
AP3S1Q92572 AC091953.2-201ENST00000623979 160 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 AP001002.2-201ENST00000625137 386 ntBASIC1.5□□□□□ -2.17
AP3S1Q92572 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
AP3S1Q92572 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3S1Q92572 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.49□□□□□ -2.17
AP3S1Q92572 U8.3-201ENST00000363321 132 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 SNORA70.4-201ENST00000365509 134 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3S1Q92572 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
AP3S1Q92572 SNORA64-201ENST00000384674 134 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 MIR491-201ENST00000384877 84 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 MIR518A2-201ENST00000384966 87 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 RNA5SP212-201ENST00000391223 107 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 PTGES3P2-201ENST00000407942 482 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 RN7SKP32-201ENST00000410167 303 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 POLHP1-201ENST00000411806 470 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.49□□□□□ -2.17
AP3S1Q92572 USP9YP15-201ENST00000442391 422 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms