Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC106872.3-201ENST00000495104 446 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 MIR4789-201ENST00000577469 82 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC010928.2-201ENST00000588017 287 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AL031176.1-201ENST00000604554 466 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC091946.2-201ENST00000606105 291 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC103710.2-201ENST00000609912 942 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC011330.2-201ENST00000621680 635 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 AC103710.2-202ENST00000641454 2853 ntBASIC1.99□□□□□ -2.09
CCDC112Q8NEF3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AL356292.1-201ENST00000283110 373 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RNU5A-1-201ENST00000362698 116 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RNA5SP363-201ENST00000365072 115 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RNU2-2P-201ENST00000410396 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AL049734.2-201ENST00000441066 616 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC013828.1-201ENST00000481845 158 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC138853.1-201ENST00000503549 823 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC114786.4-201ENST00000508771 728 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC107393.1-201ENST00000512403 346 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC114797.1-201ENST00000514003 728 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RNU6-1256P-201ENST00000516539 103 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC006518.2-201ENST00000542513 940 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 ZNF971P-201ENST00000562068 1249 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC124283.4-201ENST00000581815 456 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RPAP2P1-201ENST00000603626 1168 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.15-201ENST00000611544 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.16-201ENST00000613119 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.12-201ENST00000613778 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.20-201ENST00000613956 192 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 MIR8084-201ENST00000614105 89 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.9-201ENST00000615427 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.11-201ENST00000616345 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.2-201ENST00000616535 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.3-201ENST00000617785 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.19-201ENST00000618602 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 RNU2-1-201ENST00000618664 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.6-201ENST00000619225 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.5-201ENST00000619465 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 U2.10-201ENST00000620268 191 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC012150.2-201ENST00000621300 544 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 AC116618.1-201ENST00000634617 774 ntBASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC112Q8NEF3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC007785.2-201ENST00000598627 1916 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RNA5SP125-201ENST00000364843 120 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RNU6-76P-201ENST00000384060 104 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RNU2-49P-201ENST00000410666 184 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RPS20P15-201ENST00000412792 311 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 BX664727.1-201ENST00000416024 466 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL353691.1-201ENST00000451332 387 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC007182.2-201ENST00000489251 402 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL049874.1-201ENST00000489560 388 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC105252.1-201ENST00000503089 286 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC121161.1-201ENST00000510606 652 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC010186.2-204ENST00000537668 439 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC093510.2-201ENST00000562820 896 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC011494.1-201ENST00000596454 237 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC025811.1-201ENST00000604312 472 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC009318.2-201ENST00000610917 651 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL449363.1-201ENST00000617815 186 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AL445493.3-201ENST00000619568 477 ntBASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC112Q8NEF3 AC010329.5-201ENST00000623497 2174 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 RNU2-28P-201ENST00000410457 189 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC023141.4-201ENST00000412031 328 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC027644.1-201ENST00000419595 298 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms