Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 snoZ40.1-201ENST00000364540 72 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RNU6-1083P-201ENST00000384022 107 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RNU6-224P-201ENST00000384055 107 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RNU1-52P-201ENST00000384190 164 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 MIR524-201ENST00000385242 87 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RNU6-952P-201ENST00000391164 108 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RNU6-516P-201ENST00000411381 104 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 HMGN2P38-201ENST00000423806 265 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AL139109.1-201ENST00000455491 297 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RPL12P25-201ENST00000455592 494 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 RPL30P9-201ENST00000465586 330 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 TRBV12-1-201ENST00000479785 344 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC021382.1-201ENST00000483523 359 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 MRPL42P6-201ENST00000486397 371 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC126365.2-201ENST00000580630 379 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AL353997.4-201ENST00000586196 166 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC010133.1-201ENST00000615809 842 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC231657.1-201ENST00000624313 397 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC019226.1-201ENST00000625666 515 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 AC080128.1-201ENST00000474389 1917 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 RNU1-39P-201ENST00000383897 165 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 RNU6-1207P-201ENST00000384343 107 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC068533.2-201ENST00000411872 306 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 MTND1P21-201ENST00000412991 285 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL451054.2-201ENST00000420896 202 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 BX119904.4-201ENST00000424402 301 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 HMGB1P9-201ENST00000429856 646 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL160314.1-201ENST00000490836 438 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC090255.1-201ENST00000495779 349 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC008427.1-201ENST00000503102 655 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 HMGB3P3-201ENST00000510526 400 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 LRRC6P1-201ENST00000532188 885 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC239868.4-201ENST00000608318 671 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL138478.1-201ENST00000612252 832 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AC025594.3-201ENST00000613068 790 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL512427.1-201ENST00000618593 349 ntBASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZIC4Q8N9L1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 MTND4P35-201ENST00000604257 1375 ntBASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZIC4Q8N9L1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RNU6-343P-201ENST00000364709 104 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RNU6-754P-201ENST00000391166 107 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RPL23AP29-201ENST00000397284 453 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 TXNP7-201ENST00000406296 293 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 CCNG1P1-201ENST00000406783 885 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RNU6-920P-201ENST00000410926 92 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 USP9YP19-201ENST00000412165 485 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 MTCYBP38-201ENST00000417160 1123 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 USP9YP13-201ENST00000417797 480 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 MED14P1-201ENST00000430517 648 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 USP12PX-201ENST00000432383 1057 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms