Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.76□□□□□ -2.29
RIF1Q5UIP0 AC009318.3-201ENST00000616916 503 ntBASIC0.76□□□□□ -2.29
RIF1Q5UIP0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 PTGES3P2-201ENST00000407942 482 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 MTCO1P47-201ENST00000523889 1271 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AP001180.3-201ENST00000582221 145 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AC073055.1-201ENST00000456901 1621 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 RNA5SP499-201ENST00000363982 119 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AC241520.1-201ENST00000422654 1099 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.75□□□□□ -2.29
RIF1Q5UIP0 RNU6-964P-201ENST00000516524 69 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
RIF1Q5UIP0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RIF1Q5UIP0 RNU1-62P-201ENST00000362599 164 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RIF1Q5UIP0 RNU6-955P-201ENST00000410497 104 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 RNU4-72P-201ENST00000410754 173 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 LSM1P1-201ENST00000438629 273 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.74□□□□□ -2.29
RIF1Q5UIP0 RPS20P10-201ENST00000451209 253 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 MTND4LP3-201ENST00000468320 276 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 MRPS33P3-201ENST00000513456 322 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 SNORD84-203ENST00000584275 78 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RIF1Q5UIP0 MTND4P27-201ENST00000450813 1354 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 OR4G2P-201ENST00000328113 903 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 MIR1468-201ENST00000410600 86 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 CASP3P1-201ENST00000446037 609 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.74□□□□□ -2.29
RIF1Q5UIP0 AC098583.1-201ENST00000480875 255 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 MTND3P24-201ENST00000506306 329 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 AC008676.3-201ENST00000521237 435 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 AC245884.12-201ENST00000615364 59 ntBASIC0.74□□□□□ -2.29
RIF1Q5UIP0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 HMGB3P10-201ENST00000434734 572 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AC093155.1-201ENST00000440164 826 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AC135999.1-201ENST00000478962 479 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 SNORD23.1-201ENST00000408212 104 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AC096533.1-201ENST00000411645 353 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AC019070.1-201ENST00000415008 1024 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 AL161788.1-201ENST00000441805 169 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.73□□□□□ -2.29
RIF1Q5UIP0 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
RIF1Q5UIP0 RNU1-23P-201ENST00000363361 144 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 CD24P4-201ENST00000382840 243 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 RNU6-629P-201ENST00000384061 103 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 MIR150-201ENST00000385048 84 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 RFESDP1-201ENST00000422350 461 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC106901.1-201ENST00000425086 698 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 UBE2FP3-201ENST00000436366 524 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 PMCHL2-203ENST00000457791 237 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC117454.1-201ENST00000491120 168 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AL391261.3-201ENST00000557194 520 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC024595.1-201ENST00000623088 387 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC099654.7-201ENST00000635788 2127 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 RNU6-173P-201ENST00000364215 104 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 USP12PX-201ENST00000432383 1057 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 OR6K5P-201ENST00000447050 945 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 RPS27P21-201ENST00000486977 252 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AP001960.1-201ENST00000506494 658 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.72□□□□□ -2.29
RIF1Q5UIP0 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 AL118508.4-201ENST00000624142 1176 ntBASIC0.72□□□□□ -2.29
RIF1Q5UIP0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 RNU6-1305P-201ENST00000364353 104 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 Y_RNA.488-201ENST00000384403 102 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC073464.3-201ENST00000422564 712 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC092648.1-201ENST00000425870 423 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 SDAD1P3-201ENST00000427380 333 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 RNU6-711P-201ENST00000517255 106 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 CYP2C61P-201ENST00000604072 290 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AL161912.3-201ENST00000605404 628 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AP000654.2-201ENST00000605633 586 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC140725.3-201ENST00000616193 880 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 uc_338.22-201ENST00000622722 187 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RIF1Q5UIP0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.71□□□□□ -2.3
RIF1Q5UIP0 AC093716.1-201ENST00000435923 377 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms