Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6-1220P-201ENST00000517126 108 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC022616.3-201ENST00000523940 148 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC093012.1-202ENST00000549403 582 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC087883.1-201ENST00000551882 391 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 MIR3167-201ENST00000579623 85 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 UBL5P2-201ENST00000583788 219 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC068790.2-201ENST00000602601 557 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AL136363.2-201ENST00000604173 851 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC012557.2-201ENST00000605919 418 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC093732.2-201ENST00000607950 274 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC002546.1-201ENST00000588041 2504 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP41Q3LFD5 OR4G2P-202ENST00000641004 1759 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.87
USP41Q3LFD5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 MIR148B-201ENST00000362252 99 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 SNORD56.2-201ENST00000363242 71 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 RNU2-36P-201ENST00000410361 191 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 PIGFP2-201ENST00000421400 651 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC012498.1-201ENST00000424037 437 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 USP12PX-201ENST00000432383 1057 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 SETP5-201ENST00000437270 562 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC079448.1-201ENST00000449377 373 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 MTND2P33-201ENST00000506452 1031 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 RNU1-61P-201ENST00000516107 151 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AP001804.3-201ENST00000525146 880 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AL355836.1-201ENST00000555951 870 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AL136363.1-201ENST00000605349 337 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC006386.2-201ENST00000624491 75 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AC012005.1-201ENST00000624575 75 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 SRP72P2-201ENST00000344851 1979 ntBASIC3.39□□□□□ -1.87
USP41Q3LFD5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
USP41Q3LFD5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
USP41Q3LFD5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP41Q3LFD5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP41Q3LFD5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP41Q3LFD5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
USP41Q3LFD5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 RNU6-511P-201ENST00000363496 107 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 RNU6-1284P-201ENST00000363701 100 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 Y_RNA.296-201ENST00000364930 108 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 MIR514A1-201ENST00000385133 98 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 MIR493-201ENST00000385254 89 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 AL359634.1-202ENST00000404721 284 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 RPL5P18-201ENST00000406671 891 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 YPEL5P1-201ENST00000419731 367 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 RPL35AP12-201ENST00000425362 338 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 GAPDHP27-201ENST00000447427 1020 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 SNRPGP6-201ENST00000451124 220 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.38□□□□□ -1.87
USP41Q3LFD5 AL359385.1-201ENST00000456509 365 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 RPL31P60-201ENST00000478450 367 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 AC105252.1-201ENST00000503089 286 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 KCTD9P5-201ENST00000504141 1170 ntBASIC3.38□□□□□ -1.87
USP41Q3LFD5 RNU2-10P-201ENST00000516375 211 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms