Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.54□□□□□ -2.16
VBP1P61758 AC136601.2-201ENST00000604356 474 ntBASIC1.54□□□□□ -2.16
VBP1P61758 AC007179.3-201ENST00000604976 235 ntBASIC1.54□□□□□ -2.16
VBP1P61758 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.54□□□□□ -2.16
VBP1P61758 MIR3199-2-201ENST00000636243 86 ntBASIC1.54□□□□□ -2.16
VBP1P61758 SGO1P1-201ENST00000603525 1447 ntBASIC1.54□□□□□ -2.16
VBP1P61758 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
VBP1P61758 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
VBP1P61758 NDUFS5P4-201ENST00000412983 318 ntBASIC1.53□□□□□ -2.16
VBP1P61758 PPP1R11P2-201ENST00000423543 382 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AC008850.1-201ENST00000427546 362 ntBASIC1.53□□□□□ -2.16
VBP1P61758 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.53□□□□□ -2.16
VBP1P61758 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.53□□□□□ -2.16
VBP1P61758 RPS3AP14-201ENST00000483907 780 ntBASIC1.53□□□□□ -2.16
VBP1P61758 RPS27AP10-201ENST00000496103 208 ntBASIC1.53□□□□□ -2.16
VBP1P61758 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.53□□□□□ -2.16
VBP1P61758 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.53□□□□□ -2.16
VBP1P61758 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.53□□□□□ -2.16
VBP1P61758 AP003122.3-201ENST00000526316 255 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.53□□□□□ -2.16
VBP1P61758 AL354943.1-201ENST00000572103 781 ntBASIC1.53□□□□□ -2.16
VBP1P61758 ZNF849P-201ENST00000594711 1566 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.53□□□□□ -2.16
VBP1P61758 AC012468.1-201ENST00000604888 430 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AC026790.2-201ENST00000606282 430 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
VBP1P61758 AL731566.2-201ENST00000618971 317 ntBASIC1.53□□□□□ -2.16
VBP1P61758 MIR5739-201ENST00000619803 80 ntBASIC1.53□□□□□ -2.16
VBP1P61758 MIR4275-201ENST00000636486 87 ntBASIC1.53□□□□□ -2.16
VBP1P61758 MTND1P37-201ENST00000636562 264 ntBASIC1.53□□□□□ -2.16
VBP1P61758 MTND5P11-201ENST00000511037 1812 ntBASIC1.52□□□□□ -2.17
VBP1P61758 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VBP1P61758 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
VBP1P61758 SNORA48.7-201ENST00000391302 135 ntBASIC1.52□□□□□ -2.17
VBP1P61758 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.52□□□□□ -2.17
VBP1P61758 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.52□□□□□ -2.17
VBP1P61758 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.52□□□□□ -2.17
VBP1P61758 AL357134.1-201ENST00000445848 426 ntBASIC1.52□□□□□ -2.17
VBP1P61758 CYP2C59P-201ENST00000457790 269 ntBASIC1.52□□□□□ -2.17
VBP1P61758 SNORD121B-201ENST00000458838 81 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC005410.1-202ENST00000460347 485 ntBASIC1.52□□□□□ -2.17
VBP1P61758 RPS29P11-201ENST00000496507 171 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.52□□□□□ -2.17
VBP1P61758 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.52□□□□□ -2.17
VBP1P61758 TPT1P8-201ENST00000510120 555 ntBASIC1.52□□□□□ -2.17
VBP1P61758 FAM206BP-201ENST00000510179 541 ntBASIC1.52□□□□□ -2.17
VBP1P61758 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.52□□□□□ -2.17
VBP1P61758 NACAP3-201ENST00000552100 481 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.52□□□□□ -2.17
VBP1P61758 AC009974.1-201ENST00000608881 455 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC006386.2-201ENST00000624491 75 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC012005.1-201ENST00000624575 75 ntBASIC1.52□□□□□ -2.17
VBP1P61758 AC243829.7-201ENST00000633081 225 ntBASIC1.52□□□□□ -2.17
VBP1P61758 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VBP1P61758 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.52□□□□□ -2.17
VBP1P61758 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
VBP1P61758 SNORA48.2-201ENST00000390926 124 ntBASIC1.51□□□□□ -2.17
VBP1P61758 RNU4-53P-201ENST00000410828 140 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.51□□□□□ -2.17
VBP1P61758 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AL512661.1-201ENST00000434586 1253 ntBASIC1.51□□□□□ -2.17
VBP1P61758 RSU1P2-202ENST00000437884 485 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AC092393.1-201ENST00000439625 742 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AC003989.2-201ENST00000440224 169 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.51□□□□□ -2.17
VBP1P61758 AL050341.1-201ENST00000447743 313 ntBASIC1.51□□□□□ -2.17
VBP1P61758 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
VBP1P61758 AC107393.1-201ENST00000512403 346 ntBASIC1.51□□□□□ -2.17
VBP1P61758 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.51□□□□□ -2.17
VBP1P61758 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.51□□□□□ -2.17
VBP1P61758 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.51□□□□□ -2.17
VBP1P61758 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AC135507.2-201ENST00000612443 309 ntBASIC1.51□□□□□ -2.17
VBP1P61758 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.51□□□□□ -2.17
VBP1P61758 AP003485.2-201ENST00000623636 610 ntBASIC1.51□□□□□ -2.17
VBP1P61758 MIR219B-201ENST00000637023 88 ntBASIC1.51□□□□□ -2.17
VBP1P61758 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
VBP1P61758 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
VBP1P61758 AL356292.1-201ENST00000283110 373 ntBASIC1.5□□□□□ -2.17
VBP1P61758 RNU6-1005P-201ENST00000384519 107 ntBASIC1.5□□□□□ -2.17
VBP1P61758 RPL23AP39-201ENST00000415533 405 ntBASIC1.5□□□□□ -2.17
VBP1P61758 FAM204CP-201ENST00000424489 642 ntBASIC1.5□□□□□ -2.17
VBP1P61758 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.5□□□□□ -2.17
VBP1P61758 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.5□□□□□ -2.17
VBP1P61758 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.5□□□□□ -2.17
VBP1P61758 RANP3-201ENST00000530970 276 ntBASIC1.5□□□□□ -2.17
VBP1P61758 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VBP1P61758 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.5□□□□□ -2.17
VBP1P61758 AC026271.5-201ENST00000577873 130 ntBASIC1.5□□□□□ -2.17
VBP1P61758 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VBP1P61758 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.5□□□□□ -2.17
VBP1P61758 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.5□□□□□ -2.17
VBP1P61758 AC104763.2-201ENST00000604179 382 ntBASIC1.5□□□□□ -2.17
VBP1P61758 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.5□□□□□ -2.17
VBP1P61758 AC009032.1-201ENST00000617574 431 ntBASIC1.5□□□□□ -2.17
VBP1P61758 AC091304.6-201ENST00000619761 202 ntBASIC1.5□□□□□ -2.17
VBP1P61758 AL159972.1-201ENST00000625150 448 ntBASIC1.5□□□□□ -2.17
VBP1P61758 AC092192.1-201ENST00000633154 1018 ntBASIC1.5□□□□□ -2.17
VBP1P61758 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms