Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MTND1P18-201ENST00000448191 573 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC105417.1-201ENST00000514691 285 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNU4-29P-201ENST00000515943 174 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNU6-1038P-201ENST00000516516 104 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNU6-1153P-201ENST00000516760 105 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNA5SP503-201ENST00000517047 117 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC103783.1-201ENST00000520506 373 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 NDUFB9P3-201ENST00000521269 501 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AP005435.4-201ENST00000529514 284 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 SNRPGP16-201ENST00000533275 226 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SEC61A1P61619 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC093027.1-201ENST00000546698 429 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC087499.8-201ENST00000578406 226 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC245389.1-201ENST00000605141 529 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 TUG1_2.1-201ENST00000614234 87 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC004696.1-201ENST00000614345 607 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC006133.1-201ENST00000617106 264 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.24□□□□□ -1.89
SEC61A1P61619 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AC004925.1-201ENST00000624256 2706 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SEC61A1P61619 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SEC61A1P61619 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SEC61A1P61619 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 AC066616.2-201ENST00000559334 1481 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SEC61A1P61619 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.23□□□□□ -1.89
SEC61A1P61619 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
SEC61A1P61619 SNORA7.2-201ENST00000364446 145 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 SNORA62.3-201ENST00000365110 153 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RNU4-66P-201ENST00000365199 138 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SEC61A1P61619 SNORA24.1-201ENST00000384401 135 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RNU6-903P-201ENST00000391270 109 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AL122016.1-201ENST00000403365 367 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 NDUFB4P5-201ENST00000415445 361 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RPL26P6-201ENST00000440913 438 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 MRPL50P4-201ENST00000446432 475 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A1P61619 AL162389.1-201ENST00000449233 177 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC008481.1-201ENST00000463278 396 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RPL21P99-201ENST00000480369 423 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 RNU7-30P-201ENST00000516835 62 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 SCARNA14-201ENST00000516903 136 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 SNORA31.22-201ENST00000517204 135 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A1P61619 HMGN1P28-201ENST00000521340 364 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A1P61619 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 OR5BN1P-201ENST00000532955 829 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.23□□□□□ -1.89
SEC61A1P61619 AC078814.3-201ENST00000553036 491 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A1P61619 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.23□□□□□ -1.89
SEC61A1P61619 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 AC024619.4-201ENST00000580924 316 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 MIR5583-1-201ENST00000580941 59 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AF038458.1-201ENST00000588406 262 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AL137849.1-201ENST00000604767 169 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC087045.1-201ENST00000605856 382 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AL121772.2-201ENST00000614331 297 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AL589994.2-201ENST00000621124 579 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC079684.1-201ENST00000621405 437 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC039056.2-201ENST00000622261 511 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 C2orf27A-204ENST00000623058 969 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC011155.2-201ENST00000623202 216 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 AC034229.5-201ENST00000624258 185 ntBASIC3.23□□□□□ -1.89
SEC61A1P61619 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SEC61A1P61619 TAB3P1-202ENST00000452645 1634 ntBASIC3.22□□□□□ -1.89
SEC61A1P61619 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SEC61A1P61619 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SEC61A1P61619 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SEC61A1P61619 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A1P61619 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.22□□□□□ -1.89
SEC61A1P61619 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SEC61A1P61619 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SEC61A1P61619 AC009812.4-201ENST00000569134 1805 ntBASIC3.22□□□□□ -1.89
SEC61A1P61619 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms