Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CLIP1P30622 AC096656.1-201ENST00000623826 1364 ntBASIC1.44□□□□□ -2.18
CLIP1P30622 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CLIP1P30622 AC008850.1-201ENST00000427546 362 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 RPL30P4-201ENST00000429309 333 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 ELOCP11-201ENST00000436690 332 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 ELOCP16-201ENST00000444494 332 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 AC004022.1-201ENST00000447766 1066 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 RPL31P20-201ENST00000449593 360 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 AC098862.1-201ENST00000504991 413 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.43□□□□□ -2.18
CLIP1P30622 AC106052.1-201ENST00000608029 497 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 AC025048.6-202ENST00000627667 438 ntBASIC1.43□□□□□ -2.18
CLIP1P30622 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CLIP1P30622 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLIP1P30622 RNU6-193P-201ENST00000410977 107 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 AL022400.1-201ENST00000423946 935 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.42□□□□□ -2.18
CLIP1P30622 AC015908.1-201ENST00000478739 476 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 OR9N1P-202ENST00000494289 481 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.42□□□□□ -2.18
CLIP1P30622 AC087272.1-201ENST00000523624 533 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.42□□□□□ -2.18
CLIP1P30622 AL449363.1-201ENST00000617815 186 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 DDX43P2-201ENST00000604753 1354 ntBASIC1.42□□□□□ -2.18
CLIP1P30622 RNY1P4-201ENST00000384595 115 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.41□□□□□ -2.18
CLIP1P30622 TRIM60P13-201ENST00000432350 1283 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.41□□□□□ -2.18
CLIP1P30622 AL583843.1-201ENST00000456070 346 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 RNA5SP310-201ENST00000459084 116 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 AC005410.1-202ENST00000460347 485 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 NDUFB4P2-201ENST00000509515 391 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 RNU6-405P-201ENST00000516637 110 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 RNU6-467P-201ENST00000517027 110 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 AC074029.2-201ENST00000551045 634 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.41□□□□□ -2.18
CLIP1P30622 MIR4698-201ENST00000577795 80 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.41□□□□□ -2.18
CLIP1P30622 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.41□□□□□ -2.18
CLIP1P30622 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
CLIP1P30622 AL356473.1-201ENST00000406203 1408 ntBASIC1.41□□□□□ -2.18
CLIP1P30622 RNU6-629P-201ENST00000384061 103 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 RNU6-920P-201ENST00000410926 92 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 RPL21P32-201ENST00000419877 477 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 RPL7P30-201ENST00000420888 709 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CLIP1P30622 TRGVB-201ENST00000453257 471 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 RPL31P58-201ENST00000469001 379 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.4□□□□□ -2.18
CLIP1P30622 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.4□□□□□ -2.18
CLIP1P30622 SUB1P4-201ENST00000566062 339 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 AC011472.4-201ENST00000615848 491 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 AC025263.3-201ENST00000622965 1396 ntBASIC1.4□□□□□ -2.18
CLIP1P30622 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.4□□□□□ -2.19
CLIP1P30622 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CLIP1P30622 AL445305.1-201ENST00000432577 575 ntBASIC1.4□□□□□ -2.19
CLIP1P30622 AL022238.1-201ENST00000442557 355 ntBASIC1.4□□□□□ -2.19
CLIP1P30622 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.4□□□□□ -2.19
CLIP1P30622 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.4□□□□□ -2.19
CLIP1P30622 AP004371.1-201ENST00000525240 214 ntBASIC1.4□□□□□ -2.19
CLIP1P30622 EIF4EP5-201ENST00000528228 640 ntBASIC1.4□□□□□ -2.19
CLIP1P30622 AC023825.1-201ENST00000566704 1030 ntBASIC1.4□□□□□ -2.19
CLIP1P30622 AL442644.1-201ENST00000454390 3105 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 CCT4P2-201ENST00000233836 1548 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLIP1P30622 RNU6-19P-201ENST00000384718 107 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AL513475.1-201ENST00000406602 315 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.39□□□□□ -2.19
CLIP1P30622 RNF2P1-201ENST00000442955 1010 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC055731.1-201ENST00000474387 401 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC021146.2-201ENST00000504736 556 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC021146.8-201ENST00000507455 733 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC087854.1-201ENST00000519706 414 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC084033.1-201ENST00000550830 633 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 MTCYBP23-201ENST00000558717 1102 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.39□□□□□ -2.19
CLIP1P30622 AC025594.3-201ENST00000613068 790 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 AC109454.4-201ENST00000623411 649 ntBASIC1.39□□□□□ -2.19
CLIP1P30622 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.39□□□□□ -2.19
CLIP1P30622 SNORA1.3-201ENST00000384676 136 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 RNA5SP354-201ENST00000391247 136 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 TPRKBP1-201ENST00000456243 481 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 RNU6-1132P-201ENST00000459214 107 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.38□□□□□ -2.19
CLIP1P30622 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.38□□□□□ -2.19
CLIP1P30622 IMMP1LP2-201ENST00000552954 492 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 MIR4714-201ENST00000580728 77 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CLIP1P30622 AC006963.1-201ENST00000624003 1052 ntBASIC1.38□□□□□ -2.19
CLIP1P30622 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.38□□□□□ -2.19
CLIP1P30622 AL137003.2-201ENST00000606924 2538 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 MIR126-201ENST00000362291 85 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CLIP1P30622 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 AC005534.2-201ENST00000431047 433 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 HSPE1P21-201ENST00000438283 308 ntBASIC1.37□□□□□ -2.19
CLIP1P30622 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms