Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RARAP10276 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RARAP10276 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RARAP10276 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RARAP10276 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5□□□□□ -1.61
RARAP10276 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 AL451142.2-201ENST00000429076 2090 ntBASIC5□□□□□ -1.61
RARAP10276 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RARAP10276 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 RPL9P7-201ENST00000330965 580 ntBASIC5□□□□□ -1.61
RARAP10276 Y_RNA.352-201ENST00000365439 102 ntBASIC5□□□□□ -1.61
RARAP10276 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5□□□□□ -1.61
RARAP10276 EI24P1-201ENST00000416584 867 ntBASIC5□□□□□ -1.61
RARAP10276 AL592045.1-201ENST00000429867 352 ntBASIC5□□□□□ -1.61
RARAP10276 HSPD1P21-201ENST00000436541 245 ntBASIC5□□□□□ -1.61
RARAP10276 AL513043.1-201ENST00000439124 535 ntBASIC5□□□□□ -1.61
RARAP10276 CEACAMP7-201ENST00000444105 496 ntBASIC5□□□□□ -1.61
RARAP10276 AC073587.1-201ENST00000447093 876 ntBASIC5□□□□□ -1.61
RARAP10276 EIF4A1P11-201ENST00000451239 222 ntBASIC5□□□□□ -1.61
RARAP10276 RPL9P9-202ENST00000466501 579 ntBASIC5□□□□□ -1.61
RARAP10276 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5□□□□□ -1.61
RARAP10276 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5□□□□□ -1.61
RARAP10276 AC067942.3-201ENST00000512025 362 ntBASIC5□□□□□ -1.61
RARAP10276 RNU4-71P-201ENST00000516258 113 ntBASIC5□□□□□ -1.61
RARAP10276 MIR892C-201ENST00000516410 77 ntBASIC5□□□□□ -1.61
RARAP10276 AC134698.5-201ENST00000519444 336 ntBASIC5□□□□□ -1.61
RARAP10276 AC008033.2-201ENST00000542626 177 ntBASIC5□□□□□ -1.61
RARAP10276 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5□□□□□ -1.61
RARAP10276 MIR3910-1-201ENST00000580936 111 ntBASIC5□□□□□ -1.61
RARAP10276 OR7E18P-201ENST00000592589 702 ntBASIC5□□□□□ -1.61
RARAP10276 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
RARAP10276 MTND5P9-201ENST00000503854 1755 ntBASIC5□□□□□ -1.61
RARAP10276 INTS6P1-201ENST00000504674 2530 ntBASIC5□□□□□ -1.61
RARAP10276 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RARAP10276 Z75746.1-201ENST00000440243 2080 ntBASIC5□□□□□ -1.61
RARAP10276 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RARAP10276 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.99□□□□□ -1.61
RARAP10276 RLIMP1-201ENST00000339626 1680 ntBASIC4.99□□□□□ -1.61
RARAP10276 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 RNU1-94P-201ENST00000362627 173 ntBASIC4.99□□□□□ -1.61
RARAP10276 Y_RNA.458-201ENST00000384240 102 ntBASIC4.99□□□□□ -1.61
RARAP10276 U3.30-201ENST00000391308 210 ntBASIC4.99□□□□□ -1.61
RARAP10276 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 SPTLC1P2-201ENST00000407089 121 ntBASIC4.99□□□□□ -1.61
RARAP10276 AL603910.2-201ENST00000407268 136 ntBASIC4.99□□□□□ -1.61
RARAP10276 OR2AM1P-201ENST00000422137 422 ntBASIC4.99□□□□□ -1.61
RARAP10276 USP9YP7-201ENST00000436723 430 ntBASIC4.99□□□□□ -1.61
RARAP10276 PSMD10P3-201ENST00000437000 448 ntBASIC4.99□□□□□ -1.61
RARAP10276 AL590399.6-201ENST00000446396 307 ntBASIC4.99□□□□□ -1.61
RARAP10276 USP9YP32-201ENST00000452432 430 ntBASIC4.99□□□□□ -1.61
RARAP10276 OR51K1P-201ENST00000510214 950 ntBASIC4.99□□□□□ -1.61
RARAP10276 AC074250.1-201ENST00000511117 192 ntBASIC4.99□□□□□ -1.61
RARAP10276 RNU6-927P-201ENST00000516199 100 ntBASIC4.99□□□□□ -1.61
RARAP10276 RNU6-1315P-201ENST00000517187 99 ntBASIC4.99□□□□□ -1.61
RARAP10276 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.99□□□□□ -1.61
RARAP10276 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.99□□□□□ -1.61
RARAP10276 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.99□□□□□ -1.61
RARAP10276 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 AC022726.1-201ENST00000587475 207 ntBASIC4.99□□□□□ -1.61
RARAP10276 AC006557.5-201ENST00000603126 811 ntBASIC4.99□□□□□ -1.61
RARAP10276 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.99□□□□□ -1.61
RARAP10276 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
RARAP10276 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RARAP10276 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RARAP10276 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.98□□□□□ -1.61
RARAP10276 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RARAP10276 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RARAP10276 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RARAP10276 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RARAP10276 Y_RNA.27-201ENST00000362540 103 ntBASIC4.98□□□□□ -1.61
RARAP10276 Y_RNA.65-201ENST00000362846 100 ntBASIC4.98□□□□□ -1.61
RARAP10276 snoU2_19.2-201ENST00000363024 80 ntBASIC4.98□□□□□ -1.61
RARAP10276 SNORA36C-201ENST00000384289 132 ntBASIC4.98□□□□□ -1.61
RARAP10276 SNORA70E-201ENST00000384492 135 ntBASIC4.98□□□□□ -1.61
RARAP10276 MIR521-1-201ENST00000384902 87 ntBASIC4.98□□□□□ -1.61
RARAP10276 AL080315.1-201ENST00000406055 466 ntBASIC4.98□□□□□ -1.61
RARAP10276 RNA5SP146-201ENST00000410743 123 ntBASIC4.98□□□□□ -1.61
RARAP10276 AC114755.2-201ENST00000413520 361 ntBASIC4.98□□□□□ -1.61
RARAP10276 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.98□□□□□ -1.61
RARAP10276 AL096701.2-201ENST00000416920 238 ntBASIC4.98□□□□□ -1.61
RARAP10276 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.98□□□□□ -1.61
RARAP10276 RPL12P46-201ENST00000436610 195 ntBASIC4.98□□□□□ -1.61
RARAP10276 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.98□□□□□ -1.61
RARAP10276 AC008694.2-201ENST00000517591 306 ntBASIC4.98□□□□□ -1.61
RARAP10276 MIR5699-201ENST00000578903 90 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms