Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 UBE3AP2-201ENST00000429033 2259 ntBASIC3.86□□□□□ -1.79
RHOP08100 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RHOP08100 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RHOP08100 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 SNORD115-7-201ENST00000365306 82 ntBASIC3.85□□□□□ -1.79
RHOP08100 MIR135A2-201ENST00000384854 100 ntBASIC3.85□□□□□ -1.79
RHOP08100 MIR490-201ENST00000384865 128 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL356057.2-201ENST00000403318 432 ntBASIC3.85□□□□□ -1.79
RHOP08100 FAT1P1-201ENST00000406588 507 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL606923.1-201ENST00000406616 190 ntBASIC3.85□□□□□ -1.79
RHOP08100 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.85□□□□□ -1.79
RHOP08100 RPL21P24-201ENST00000413752 448 ntBASIC3.85□□□□□ -1.79
RHOP08100 UBE2FP1-201ENST00000416536 447 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.85□□□□□ -1.79
RHOP08100 AC097713.2-201ENST00000430199 356 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC007677.1-201ENST00000445757 515 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.85□□□□□ -1.79
RHOP08100 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL162395.1-201ENST00000457882 422 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC008481.1-201ENST00000463278 396 ntBASIC3.85□□□□□ -1.79
RHOP08100 RPL21P99-201ENST00000480369 423 ntBASIC3.85□□□□□ -1.79
RHOP08100 RN7SL432P-201ENST00000484057 298 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC078817.1-201ENST00000492623 435 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC098591.2-201ENST00000510152 315 ntBASIC3.85□□□□□ -1.79
RHOP08100 FAM206BP-201ENST00000510179 541 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC026801.2-201ENST00000515352 425 ntBASIC3.85□□□□□ -1.79
RHOP08100 RANP9-201ENST00000519957 271 ntBASIC3.85□□□□□ -1.79
RHOP08100 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.85□□□□□ -1.79
RHOP08100 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.85□□□□□ -1.79
RHOP08100 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.85□□□□□ -1.79
RHOP08100 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
RHOP08100 SCOCP1-201ENST00000554676 349 ntBASIC3.85□□□□□ -1.79
RHOP08100 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.85□□□□□ -1.79
RHOP08100 MIR5195-201ENST00000583555 115 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC010928.3-201ENST00000587712 541 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC243960.4-201ENST00000600532 288 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC012669.1-201ENST00000603209 283 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.6-201ENST00000603753 252 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.11-201ENST00000604059 253 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC008162.1-201ENST00000604718 254 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.1-201ENST00000604752 252 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.5-201ENST00000605253 252 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.12-201ENST00000605291 253 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.8-201ENST00000605353 252 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL670379.7-201ENST00000605823 252 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC012603.1-201ENST00000606424 528 ntBASIC3.85□□□□□ -1.79
RHOP08100 AL022345.1-201ENST00000607292 135 ntBASIC3.85□□□□□ -1.79
RHOP08100 AC064836.2-201ENST00000609491 462 ntBASIC3.85□□□□□ -1.79
RHOP08100 MIR1302-1-201ENST00000637932 143 ntBASIC3.85□□□□□ -1.79
RHOP08100 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.85□□□□□ -1.79
RHOP08100 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.85□□□□□ -1.79
RHOP08100 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
RHOP08100 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 AL365440.1-201ENST00000436135 2167 ntBASIC3.85□□□□□ -1.79
RHOP08100 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RHOP08100 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
RHOP08100 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
RHOP08100 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.84□□□□□ -1.79
RHOP08100 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.79
RHOP08100 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RHOP08100 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 RNA5SP50-201ENST00000363731 107 ntBASIC3.84□□□□□ -1.79
RHOP08100 Y_RNA.184-201ENST00000363884 108 ntBASIC3.84□□□□□ -1.79
RHOP08100 RNU6-188P-201ENST00000364207 107 ntBASIC3.84□□□□□ -1.79
RHOP08100 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.84□□□□□ -1.79
RHOP08100 SNORA32.2-201ENST00000384049 122 ntBASIC3.84□□□□□ -1.79
RHOP08100 SNORA24.1-201ENST00000384401 135 ntBASIC3.84□□□□□ -1.79
RHOP08100 MIR513A2-201ENST00000385249 127 ntBASIC3.84□□□□□ -1.79
RHOP08100 TXNP7-201ENST00000406296 293 ntBASIC3.84□□□□□ -1.79
RHOP08100 RNU6-712P-201ENST00000410558 100 ntBASIC3.84□□□□□ -1.79
RHOP08100 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.84□□□□□ -1.79
RHOP08100 HSPE1P1-201ENST00000421494 318 ntBASIC3.84□□□□□ -1.79
RHOP08100 RAC1P6-201ENST00000423911 575 ntBASIC3.84□□□□□ -1.79
RHOP08100 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 GAPDHP27-201ENST00000447427 1020 ntBASIC3.84□□□□□ -1.79
RHOP08100 AC233279.1-201ENST00000455300 423 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL590639.1-201ENST00000456484 337 ntBASIC3.84□□□□□ -1.79
RHOP08100 AC023141.12-201ENST00000512399 199 ntBASIC3.84□□□□□ -1.79
RHOP08100 RNU4-49P-201ENST00000516080 140 ntBASIC3.84□□□□□ -1.79
RHOP08100 RN7SKP256-201ENST00000517201 314 ntBASIC3.84□□□□□ -1.79
RHOP08100 NARSP2-201ENST00000518524 679 ntBASIC3.84□□□□□ -1.79
RHOP08100 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.79
RHOP08100 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RHOP08100 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.84□□□□□ -1.79
RHOP08100 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.84□□□□□ -1.79
RHOP08100 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.84□□□□□ -1.79
RHOP08100 AC005668.1-201ENST00000571142 476 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL355375.2-201ENST00000574825 175 ntBASIC3.84□□□□□ -1.79
RHOP08100 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.84□□□□□ -1.79
RHOP08100 AC007687.1-201ENST00000602704 304 ntBASIC3.84□□□□□ -1.79
RHOP08100 AC025946.2-201ENST00000603398 234 ntBASIC3.84□□□□□ -1.79
RHOP08100 AL022099.1-201ENST00000604551 712 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms